DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and yghA

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_417476.1 Gene:yghA / 947478 ECOCYCID:EG11292 Length:294 Species:Escherichia coli


Alignment Length:252 Identity:74/252 - (29%)
Similarity:119/252 - (47%) Gaps:14/252 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GVLAGKVALVTGAGSGIGRATCRLLARDGAKVI-----AVDRNLKAAQETVQELGSERSAALEVD 63
            |.|..:.|||||..||||||.....||:||.|.     ..:.:.:..::.::|.| .::..|..|
E. coli    45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG-RKAVLLPGD 108

  Fly    64 VSSAQSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAK 128
            :|..:..:..|.||.|.......:.:.:........:..:....:...:.:|:...|.:||    
E. coli   109 LSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQ---- 169

  Fly   129 AMIEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDT 193
            ..|....:..:|:..|||.|...:....:||||||.:::::...:|:..:.|||||.:.||.|.|
E. coli   170 EAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT 234

  Fly   194 PMV---AVVPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
            .:.   ....|.:.| ..|:.|:.|.|||.|:|.|..:|||.:||||......|.||
E. coli   235 ALQISGGQTQDKIPQ-FGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 72/247 (29%)
yghANP_417476.1 PRK07985 1..294 CDD:181188 74/252 (29%)

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