DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and AT5G18210

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_197322.2 Gene:AT5G18210 / 831939 AraportID:AT5G18210 Length:277 Species:Arabidopsis thaliana


Alignment Length:247 Identity:85/247 - (34%)
Similarity:128/247 - (51%) Gaps:25/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVGVLAGKVALVTGAGSGIGRATCRLLARDGAKVIA--VDRNLKAAQETVQELGSERSAALE--- 61
            ||..|||:||:|||:..|||||....||..|||::.  ..|:.:|.| ...|:.|......:   
plant     4 SVSSLAGRVAIVTGSSRGIGRAIAIHLAELGAKIVINYTTRSTEADQ-VAAEINSSAGTVPQPIA 67

  Fly    62 ----VDVSSAQSVQ--FSVAEALKKFQQAPTIVVNSAGITRDGY--LLKMPERDYDDVYGVNLKG 118
                .|:|....::  |..||  |.|.....|:||||||....|  :...|..::|.::.||.:|
plant    68 VVFLADISEPSQIKSLFDAAE--KAFNSPVHILVNSAGILNPNYPTIANTPIEEFDRIFKVNTRG 130

  Fly   119 TFLVTQAYAKAMIEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRV 183
            :||..:..||.:  ::...|.|:.|:|.:.:....||..|.|:||.|.:..::.:||....||..
plant   131 SFLCCKEAAKRL--KRGGGGRIILLTSSLTEALIPGQGAYTASKAAVEAMVKILAKELKGLGITA 193

  Fly   184 NCILPGYIDTPMVAVVPDSVKQE----VVQRCPLGRLGQPEEIAEVIAFLAS 231
            ||:.||.:.|.|..   |...:|    :::|.|.||||:.::||.|:.||||
plant   194 NCVSPGPVATEMFF---DGKSEETVMNIIERSPFGRLGETKDIASVVGFLAS 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 80/240 (33%)
AT5G18210NP_197322.2 Rossmann-fold NAD(P)(+)-binding proteins 8..245 CDD:473865 83/243 (34%)

Return to query results.
Submit another query.