DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and NYC1

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_567400.1 Gene:NYC1 / 826942 AraportID:AT4G13250 Length:496 Species:Arabidopsis thaliana


Alignment Length:259 Identity:65/259 - (25%)
Similarity:107/259 - (41%) Gaps:49/259 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVTGAGSGIGRATCRLLARDGAKVI-------AVDRNLKAAQETVQELGSERSAALEVDVSSAQS 69
            ::||:..|:|:|..|.....|.:||       :||..:|..::.::|:.|..|.:....:|.|:.
plant   165 VITGSTRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKV 229

  Fly    70 VQFSV-------AEALKKFQ----QAPTIVVNSAGITRDGY--LLKMPERDYDDVYGVNLKGTFL 121
            |..:.       .|.|..|.    .:..|.:|:|| |..|:  ||:..|.|...:...||.|:.|
plant   230 VGIACDVCKPEDVEKLSNFAVKELGSINIWINNAG-TNKGFRPLLEFTEEDITQIVSTNLIGSIL 293

  Fly   122 VTQAYAKAMIEQKLENGTIVNLSSIVAKMNNVGQ--------ANYAATKAGVISFTEVASKEFGK 178
            .|:.....|..|. ..|.|.|       |:..|.        |.|.:||.|:..|.....||..|
plant   294 CTRGAMDVMSRQH-SGGHIFN-------MDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQK 350

  Fly   179 FGIRVNCILPGYIDTPMVAVVPDSVKQEVVQR--CPLGRLGQPEEIAEVIAFLASPQSSYVNGA 240
            ..:.::...||.:.|.:: :...|:|.:.:..  |.|     ||.:|..:.    |:...|.|:
plant   351 TNVGLHTASPGMVLTELL-LSGSSIKNKQMFNIICEL-----PETVARTLV----PRMRVVKGS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 65/259 (25%)
NYC1NP_567400.1 SDR_c 164..395 CDD:212491 62/244 (25%)

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