DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and SDR3

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_182235.1 Gene:SDR3 / 819326 AraportID:AT2G47130 Length:257 Species:Arabidopsis thaliana


Alignment Length:246 Identity:71/246 - (28%)
Similarity:124/246 - (50%) Gaps:5/246 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSAALEVDVSSAQSV 70
            |.||:|::||..||||....||....||||:.||...:..|.....:|.::::....||::.:.|
plant     6 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVTNEKEV 70

  Fly    71 QFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMIEQKL 135
            :.:|...::|:.:...:..|:..:.:.|..|.:....:|....||::|.....:..|:||:| |.
plant    71 ENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKHAARAMVE-KG 134

  Fly   136 ENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPMVAVVP 200
            ..|:||..:|:.:::...|...|.|:|..::...:.|....||:|||||.:.|..:.|.:.:...
plant   135 TRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNGVAPYAVATAINSRDE 199

  Fly   201 DSVKQEVVQRCPLGRLG----QPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
            ::|:.........|.|.    :...:||...||||..|:||:|..:.|.||
plant   200 ETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQNLAVDGG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 69/243 (28%)
SDR3NP_182235.1 Rossmann-fold NAD(P)(+)-binding proteins 5..252 CDD:473865 71/246 (29%)

Return to query results.
Submit another query.