DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and AT2G29360

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_180497.1 Gene:AT2G29360 / 817485 AraportID:AT2G29360 Length:271 Species:Arabidopsis thaliana


Alignment Length:247 Identity:72/247 - (29%)
Similarity:123/247 - (49%) Gaps:8/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETV---QELGSERSAALEVDVSSA 67
            |.|..|||||...|||.|....||..||::....|:....||::   |..|.:.:.:: .||||.
plant    16 LVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTSV-CDVSSR 79

  Fly    68 QSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMIE 132
            ...:..:......|:....|:||:.|.......|:....|:......||:..|.::| .|..:::
plant    80 DKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQ-LAHPLLK 143

  Fly   133 QKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPMV- 196
            .. .:|:||.:||:...::..|.:.|..:|..:.......:.|:....||.|.:.|.:|:||:| 
plant   144 AS-GSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCPWFIETPLVT 207

  Fly   197 -AVVPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
             ::..:..::||..|.|:||:|:..|::.::|||..|.:||:.|..|.|.||
plant   208 ESLSNEEFRKEVESRPPMGRVGEVNEVSSLVAFLCLPAASYITGQTICVDGG 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 70/244 (29%)
AT2G29360NP_180497.1 Rossmann-fold NAD(P)(+)-binding proteins 13..263 CDD:473865 72/247 (29%)

Return to query results.
Submit another query.