DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and Bdh2

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001165526.1 Gene:Bdh2 / 69772 MGIID:1917022 Length:255 Species:Mus musculus


Alignment Length:255 Identity:90/255 - (35%)
Similarity:142/255 - (55%) Gaps:21/255 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVGVLAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSAALEV-DVS 65
            ::|.|.|||.::|.|..|||||:....||:||||||.|.|    :..:|||.|.|.....| ||:
Mouse    10 TMGRLDGKVIVLTAAAQGIGRASALAFAREGAKVIATDIN----ESKLQELESYRGIQTRVLDVT 70

  Fly    66 SAQSV-QFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKA 129
            ..:.: ||  |..:::..    ::.|.||....|.:|...|:|:|....:|::..||:.:|:...
Mouse    71 KKRQIDQF--ASEIERID----VLFNVAGFVHHGTILDCEEKDWDFSMNLNVRSMFLMIKAFLPK 129

  Fly   130 MIEQKLENGTIVNLSSIVAKMNNV-GQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDT 193
            |:.||  :|.|:|:||:.:.:..| .:..|:||||.||..|:..:.:|.:.|||.||:.||.:||
Mouse   130 MLAQK--SGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDT 192

  Fly   194 PMV---AVVPDSVKQEV---VQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
            |.:   ....|:.|:.:   :.|...||....||:|.:..:|||.:|:||.|..:.:.||
Mouse   193 PSLQERIQARDNPKEALKTFLNRQKTGRFASAEEVALLCVYLASDESAYVTGNPVIIDGG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 87/248 (35%)
Bdh2NP_001165526.1 DHRS6_like_SDR_c 15..255 CDD:187626 88/250 (35%)

Return to query results.
Submit another query.