DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and hsd17b8

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001005292.2 Gene:hsd17b8 / 64815 ZFINID:ZDB-GENE-010110-1 Length:256 Species:Danio rerio


Alignment Length:247 Identity:123/247 - (49%)
Similarity:166/247 - (67%) Gaps:4/247 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSA----ALEVDVSS 66
            |..::.||||.|||||||.|:..|.:||.|:..|||.::|.:|::.|..|...    ||.|||||
Zfish     7 LISRLTLVTGGGSGIGRAVCQRFATEGASVVVADRNEESANQTLELLPREHRGQEHMALGVDVSS 71

  Fly    67 AQSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMI 131
            ..||:..|....:::.|.|::.||:||||:|.::|||.|.|:|.|..||||||||||||.:||::
Zfish    72 KDSVEKLVTSIQRRYFQPPSVCVNAAGITQDEFILKMEEDDFDKVIKVNLKGTFLVTQAVSKALV 136

  Fly   132 EQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPMV 196
            ......|:|:.:.|||.|:.|:||.|||::||||...|..|:||..|||||.||:|||:|.|||.
Zfish   137 SAGSAKGSIITVGSIVGKVGNIGQVNYASSKAGVQGLTRTAAKELSKFGIRCNCVLPGFITTPMT 201

  Fly   197 AVVPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGGL 248
            ..||:.|..::....||||:|:|.|:|:..|||||..|.|:.|.:|||.|||
Zfish   202 DKVPEKVIDKITSIIPLGRMGEPAEVADACAFLASDDSRYITGVSIEVAGGL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 120/242 (50%)
hsd17b8NP_001005292.2 BKR_SDR_c 10..254 CDD:187594 122/244 (50%)

Return to query results.
Submit another query.