DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and CG8888

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster


Alignment Length:191 Identity:43/191 - (22%)
Similarity:86/191 - (45%) Gaps:13/191 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGKVALVTGAGSGIGRATCRLLARDGAKVIA-----VDRNLKAAQETVQELGSERSAALEVDVSS 66
            :||..|:||..:.:.....:.|...|..|.|     ::.:.:|  :.::|:.|.|...|.:||:|
  Fly    94 SGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEESDEA--KILKEVTSGRMKLLHLDVTS 156

  Fly    67 AQSVQFS---VAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAK 128
            .:::..:   |::.|....:....||:.|.....|.|..:|.........:||.|:..:||.:..
  Fly   157 EKTILEAARYVSQHLPHGAEGLWSVVHCAHWIALGELEWIPFAVLRKSLDLNLLGSARLTQIFLP 221

  Fly   129 AMIEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPG 189
            .:   :..:|.:|.|:|.:.::.:..:....||:|.|..|.....:|....|:.|:.:..|
  Fly   222 LV---RRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAACLRQEMRTRGVDVSVVAAG 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 42/189 (22%)
CG8888NP_610724.1 Rossmann-fold NAD(P)(+)-binding proteins 96..380 CDD:473865 42/189 (22%)

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