DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and Hsd17b8

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_006256026.1 Gene:Hsd17b8 / 361802 RGDID:1303158 Length:273 Species:Rattus norvegicus


Alignment Length:243 Identity:118/243 - (48%)
Similarity:164/243 - (67%) Gaps:10/243 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERS---------AALEVDVSSAQ 68
            ::|||||||||....||.:||.|.|.|.:..|||:||:.||:..|         ||.:.|||...
  Rat    16 ISGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGNPGSEDREPRGKHAAFQADVSEGP 80

  Fly    69 SVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMIEQ 133
            :.:..:.:....|.:.|::||:.||||||.:||.|.|.|:|.|..||||||||||||.|:|::..
  Rat    81 AAKRLLEQVQACFFRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSS 145

  Fly   134 KLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPMVAV 198
            . ..|:|:|:||||.|:.|:||.|||::|||||..|:.|::|.|:.|||.|.:|||:|.|||...
  Rat   146 G-GRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK 209

  Fly   199 VPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTG 246
            :|:.||.:|....|||.:|.||::|:|:|||||..|.|:.||::||:|
  Rat   210 MPEKVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITGASVEVSG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 118/243 (49%)
Hsd17b8XP_006256026.1 BKR_SDR_c 16..257 CDD:187594 117/241 (49%)

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