DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and Hsd17b8

DIOPT Version :9

Sequence 1:NP_001259199.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_006256026.1 Gene:Hsd17b8 / 361802 RGDID:1303158 Length:273 Species:Rattus norvegicus


Alignment Length:243 Identity:118/243 - (48%)
Similarity:164/243 - (67%) Gaps:10/243 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERS---------AALEVDVSSAQ 68
            ::|||||||||....||.:||.|.|.|.:..|||:||:.||:..|         ||.:.|||...
  Rat    16 ISGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGNPGSEDREPRGKHAAFQADVSEGP 80

  Fly    69 SVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMIEQ 133
            :.:..:.:....|.:.|::||:.||||||.:||.|.|.|:|.|..||||||||||||.|:|::..
  Rat    81 AAKRLLEQVQACFFRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSS 145

  Fly   134 KLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPMVAV 198
            . ..|:|:|:||||.|:.|:||.|||::|||||..|:.|::|.|:.|||.|.:|||:|.|||...
  Rat   146 G-GRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK 209

  Fly   199 VPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTG 246
            :|:.||.:|....|||.:|.||::|:|:|||||..|.|:.||::||:|
  Rat   210 MPEKVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITGASVEVSG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_001259199.1 fabG 6..248 CDD:235546 118/243 (49%)
BKR_SDR_c 9..248 CDD:187594 118/243 (49%)
Hsd17b8XP_006256026.1 BKR_SDR_c 16..257 CDD:187594 117/241 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350619
Domainoid 1 1.000 225 1.000 Domainoid score I2464
eggNOG 1 0.900 - - E2759_KOG1200
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56588
Inparanoid 1 1.050 232 1.000 Inparanoid score I3351
OMA 1 1.010 - - QHG49380
OrthoDB 1 1.010 - - D1226147at2759
OrthoFinder 1 1.000 - - FOG0000019
OrthoInspector 1 1.000 - - oto96348
orthoMCL 1 0.900 - - OOG6_100272
Panther 1 1.100 - - LDO PTHR42760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X181
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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