DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3603 and Ldsdh1

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:192 Identity:54/192 - (28%)
Similarity:91/192 - (47%) Gaps:9/192 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSAAL--EVDVSSAQSV 70
            |||.|:||.|.|:|:......|:.||.::..|.|.:...:||:|:.:....|.  ..:|:..:.:
  Fly    58 GKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREEL 122

  Fly    71 QFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAMIEQKL 135
             ..:|:.::|......:|||:|||.....||:..|.:...:|.:|:...|.:.||:...|||:  
  Fly   123 -IELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIER-- 184

  Fly   136 ENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEF----GKFGIRVNCILPGYIDT 193
            ..|:||.|||.......:....|..||..|..:.....:|.    .:..:::..|.|..|||
  Fly   185 NEGSIVALSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDT 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 53/191 (28%)
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 52/190 (27%)

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