DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and SPOM_SPCC1739.08C

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_588416.1 Gene:SPOM_SPCC1739.08C / 2539211 PomBaseID:SPCC1739.08C Length:261 Species:Schizosaccharomyces pombe


Alignment Length:251 Identity:75/251 - (29%)
Similarity:119/251 - (47%) Gaps:21/251 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LAGKVALVTGAGSGIGRATCRLLARDGAKVI-------AVDRNLKAAQETVQELGSERSAALEVD 63
            |.||..:|.||..|||.:.....|:.|..||       ..::..|.|:||..::.:     |::|
pombe    19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHT-----LKID 78

  Fly    64 VSSAQSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAK 128
            :|.:.:|:..|.|..|.|::...:|.| ||:.....:|..|..:::.|..:|....:.|  ||..
pombe    79 ISRSDTVEAGVEEIQKIFKEIHVVVAN-AGMPFRRSVLDSPPHEFEKVMNINTNSVYRV--AYYM 140

  Fly   129 AMIEQKLENGTIVNLSSIVAKMNNVGQ--ANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYI 191
            ..|.:|...|.::..:|:.|.:.|..|  |.|.|:||.|....:..:.|:.:|. |:|.:.|||.
pombe   141 GKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAVRQLCKALAVEWAEFA-RINSVSPGYF 204

  Fly   192 DTPMVAVVPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
            .|.|...  :.:|| .....|..|||...|:.....:|||..||:|.|..:.|.||
pombe   205 ATDMPGY--EFLKQ-WEPYVPFKRLGLTPELRGTYLYLASNASSFVTGLDLIVDGG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 73/248 (29%)
SPOM_SPCC1739.08CNP_588416.1 MDH-like_SDR_c 14..260 CDD:187610 75/251 (30%)

Return to query results.
Submit another query.