DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and Dcxr

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_599214.1 Gene:Dcxr / 171408 RGDID:620031 Length:244 Species:Rattus norvegicus


Alignment Length:249 Identity:84/249 - (33%)
Similarity:127/249 - (51%) Gaps:11/249 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVGVLAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERSAALEVDVS 65
            |.:| |||:.|||||||.||||:|...|...||:|:||.|..:.....|:|........  ||::
  Rat     1 MDLG-LAGRRALVTGAGKGIGRSTVLALQAAGAQVVAVSRTREDLDSLVRECPGVEPVC--VDLA 62

  Fly    66 SAQSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAYAKAM 130
            ..::.:    :||........:|.|:|..|...: |::.:...|..:.||.:....|:|..|:.|
  Rat    63 DWEATE----QALSNVGPVDLLVNNAAVATLQPF-LEVTKEACDTSFNVNFRAVVQVSQIVARGM 122

  Fly   131 IEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYIDTPM 195
            |.:.:. |.|||:||..::........|.:||..:...|:|.:.|.|...||||.:.|..:.|||
  Rat   123 IARGVP-GAIVNVSSQASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPM 186

  Fly   196 -VAVVPDSVKQEV-VQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGG 247
             .|...|..|.:| :.|.|||:..:.|.:.:.|.||.|.:||...|:|:.|.||
  Rat   187 GRANWSDPHKAKVMLDRIPLGKFAEVENVVDTILFLLSNRSSMTTGSALPVDGG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 79/241 (33%)
DcxrNP_599214.1 XR_like_SDR_c 1..243 CDD:187609 84/249 (34%)

Return to query results.
Submit another query.