DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3603 and Hsd17b8

DIOPT Version :10

Sequence 1:NP_570046.1 Gene:CG3603 / 31289 FlyBaseID:FBgn0029648 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_038571.2 Gene:Hsd17b8 / 14979 MGIID:95911 Length:259 Species:Mus musculus


Alignment Length:252 Identity:126/252 - (50%)
Similarity:170/252 - (67%) Gaps:10/252 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LAGKVALVTGAGSGIGRATCRLLARDGAKVIAVDRNLKAAQETVQELGSERS---------AALE 61
            |...:|||||||||||||....||.:||.|.|.|.:..|||:||:.|||..|         ||.:
Mouse     7 LRSALALVTGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGSPGSEDGAPRGKHAAFQ 71

  Fly    62 VDVSSAQSVQFSVAEALKKFQQAPTIVVNSAGITRDGYLLKMPERDYDDVYGVNLKGTFLVTQAY 126
            .|||...:.:..:.|....|.:.|::||:.||||||.:||.|.|.|:|.|..||||||||||||.
Mouse    72 ADVSQGPAARRLLEEVQACFSRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNLKGTFLVTQAA 136

  Fly   127 AKAMIEQKLENGTIVNLSSIVAKMNNVGQANYAATKAGVISFTEVASKEFGKFGIRVNCILPGYI 191
            |:|::... ..|:|:|:|||:.|:.|:||.|||::|||||..|:.|::|.|:.|||.|.:|||:|
Mouse   137 AQALVSSG-GRGSIINISSIIGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFI 200

  Fly   192 DTPMVAVVPDSVKQEVVQRCPLGRLGQPEEIAEVIAFLASPQSSYVNGAAIEVTGGL 248
            .|||...:|:.||.:|....|||.:|.||::|:|:|||||..|.|:.||::||:|||
Mouse   201 ATPMTQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITGASVEVSGGL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3603NP_570046.1 BKR_SDR_c 9..248 CDD:187594 123/247 (50%)
Hsd17b8NP_038571.2 Rossmann-fold NAD(P)(+)-binding proteins 11..258 CDD:473865 125/248 (50%)

Return to query results.
Submit another query.