DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3588 and vaspa

DIOPT Version :9

Sequence 1:NP_570036.3 Gene:CG3588 / 31278 FlyBaseID:FBgn0025643 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_001103922.1 Gene:vaspa / 555805 ZFINID:ZDB-GENE-070424-68 Length:412 Species:Danio rerio


Alignment Length:171 Identity:48/171 - (28%)
Similarity:66/171 - (38%) Gaps:48/171 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 GGVGGAGAGANAGGFGGGADANSGA--------NGGGGSAGANAGANGGFGGFGGFGGFGGGGGG 639
            ||.||.|.|...||.||.|.|.:||        :.||.:..|:|.:.||.||..|.||.||||||
Zfish   216 GGGGGGGGGGGGGGDGGLASALAGAKLRKVAKDDSGGPAPAASASSGGGGGGSSGGGGGGGGGGG 280

  Fly   640 GANANSNAFGGYDGFGFFGLRQRAQQKIRLQRWQPRTQNGTSSRGTSTNEN--FEYV-------- 694
            |              |..|.......:.|.....|..:...||..:::|::  .:.|        
Zfish   281 G--------------GLMGEMSAILARRRKVADTPVVKKEESSGDSASNDSKAADVVKKPWEKPS 331

  Fly   695 YFNRTSSSSRLEDLQP----------------DNDDSSGRD 719
            ...|.:|.|:.:|..|                :..||..:|
Zfish   332 SVTRVNSGSKTQDKSPVSPATAAPLSRLRSGSNTGDSGSKD 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3588NP_570036.3 None
vaspaNP_001103922.1 EVH1_Ena_VASP-like 5..114 CDD:269918
VASP_tetra 374..408 CDD:285929
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11202
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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