DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3526 and AT1G02750

DIOPT Version :9

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_171775.2 Gene:AT1G02750 / 839432 AraportID:AT1G02750 Length:221 Species:Arabidopsis thaliana


Alignment Length:167 Identity:37/167 - (22%)
Similarity:53/167 - (31%) Gaps:61/167 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCA-AVPLSQPSHIAHIANHLMFSPSHR 161
            |..:.||.|.. .:.:.:|..|..:.||......|||||: .|.:..   :.||.:|      ||
plant    44 AVEYPCPFCAS-DYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHM---VDHITSH------HR 98

  Fly   162 ATGDPMIDISATSQAEGS-----------------SLP--QNSAVSSGSGAQHTFSSSEN----- 202
                   |:..:.|.|.|                 .||  .|............|.|..|     
plant    99 -------DVLKSEQKEMSYREDPYLSDKYLQPHLDELPPSMNHHQHPSKHVSDQFLSFINNSALP 156

  Fly   203 SQVRFLLPG-------------------NRAPLADSD 220
            :|.:.:||.                   :..||:|||
plant   157 NQTKLVLPDSSVEDKNPIKDSSAAKEGTSSCPLSDSD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078
zf-Di19 99..149 CDD:283297 13/50 (26%)
AT1G02750NP_171775.2 zf-Di19 46..98 CDD:283297 16/61 (26%)
Di19_C <138..212 CDD:291251 11/56 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.