DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3526 and Kcmf1

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_062689.2 Gene:Kcmf1 / 74287 MGIID:1921537 Length:381 Species:Mus musculus


Alignment Length:199 Identity:69/199 - (34%)
Similarity:98/199 - (49%) Gaps:32/199 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFA 89
            |.|..|.||.|........|||||.|.|||||:.|.|:|.:...|:.|||:||::.|...:|::.
Mouse     2 SRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYG 66

  Fly    90 GEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHI-----AH 149
            ||...:....|||||.||:||::...|:.|....|....|..|||:|||:|...|:|:     ||
Mouse    67 GEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAH 131

  Fly   150 I---------------ANHL--MFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSG-SGAQHT 196
            :               ..|:  ||.|. |..|.|        :|..|::...|:.:.| |.:|.:
Mouse   132 LTLEHRAPRDLDESSGVRHVRRMFHPG-RGLGGP--------RARRSNMHFTSSSTGGLSSSQSS 187

  Fly   197 FSSS 200
            :|.|
Mouse   188 YSPS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 23/47 (49%)
zf-Di19 99..149 CDD:428539 22/54 (41%)
Kcmf1NP_062689.2 ZZ_PCMF_like 7..55 CDD:239078 23/47 (49%)
zf-Di19 76..137 CDD:428539 24/60 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..194 14/47 (30%)

Return to query results.
Submit another query.