DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Rnf125

DIOPT Version :9

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001351902.1 Gene:Rnf125 / 67664 MGIID:1914914 Length:233 Species:Mus musculus


Alignment Length:224 Identity:51/224 - (22%)
Similarity:69/224 - (30%) Gaps:82/224 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RTHELSGSPSM----------------PRRRQIGHTSGHCNVRCDGC------GNNRMTFYRYKC 47
            ||.|.||...:                |.|.:.||      |.|..|      .||:.|     |
Mouse    20 RTLERSGDSELPITSFDCSVCLEVLHQPVRTRCGH------VFCRSCIATSIKNNNKWT-----C 73

  Fly    48 LHC-------------------LDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELH------ 87
            .:|                   .:|..|::|             ..|.||.|   :..|      
Mouse    74 PYCRAYLPSEGVPATDIAKRMKSEYQNCAEC-------------GTLVCLSD---MRAHIRTCEK 122

  Fly    88 FAGEPIPILCADSFT----CPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHI- 147
            :..:..|:|.....|    ||.| :.....:.|..||..:||..|....||:|.:.|...||.. 
Mouse   123 YIDKYGPLLELGDTTARCVCPFC-QRELDEDCLLDHCIIHHRSERRPVFCPLCHSRPDESPSTFN 186

  Fly   148 AHIANHLMFSPSHRATGDPMIDISATSQA 176
            ..:..||..  ||....|..||.....:|
Mouse   187 GSLIRHLQV--SHTLFYDDFIDFDIIEEA 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 12/72 (17%)
zf-Di19 99..149 CDD:283297 16/54 (30%)
Rnf125NP_001351902.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 4/6 (67%)
RING_Ubox 35..77 CDD:327409 11/52 (21%)
Interaction with the C2HC RNF-type zinc finger. /evidence=ECO:0000250|UniProtKB:Q96EQ8 43..45 0/1 (0%)
Interaction with the RING-type zinc finger. /evidence=ECO:0000250|UniProtKB:Q96EQ8 110..114 2/6 (33%)
Linker region. /evidence=ECO:0000250|UniProtKB:Q96EQ8 121..129 0/7 (0%)
zf-Di19 142..>174 CDD:310299 11/32 (34%)
Required for interaction with ubiquitin and for autoubiquitination 211..225 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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