DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and rnf138

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001016429.2 Gene:rnf138 / 549183 XenbaseID:XB-GENE-1001373 Length:222 Species:Xenopus tropicalis


Alignment Length:155 Identity:37/155 - (23%)
Similarity:58/155 - (37%) Gaps:38/155 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CLHC----------LDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFAGEPIPILCAD-S 100
            |::|          |.|..|...:|   ..||...|..:|  .|:.:.:           |.| .
 Frog    85 CMYCGKQVKLHYMKLHYKSCRKYQE---EYGLSPKDPTIQ--KDQKSTK-----------CQDPK 133

  Fly   101 FTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQP-----SHIAHIANHLMFSPSH 160
            :.||:|.|...|...|..||.:.|.......:||:||.:|...|     :.|||:      :..|
 Frog   134 YKCPLCSEQNLSQRSLLEHCNNVHYYQEVEMVCPICATLPWGDPIQTTGNIIAHL------NARH 192

  Fly   161 RATGDPMIDISATSQAEGSSLPQNS 185
            |......::|....:|:.....:||
 Frog   193 RFNYQEFMNIHLDEEAQFQKAIENS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 10/40 (25%)
zf-Di19 99..149 CDD:428539 17/55 (31%)
rnf138NP_001016429.2 RING-HC_RNF138 13..65 CDD:438206
zf_C2HC_14 79..111 CDD:465807 6/28 (21%)
zf-Di19 134..193 CDD:428539 18/64 (28%)
Blue background indicates that the domain is not in the aligned region.

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