DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and rnf114

DIOPT Version :10

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001001828.2 Gene:rnf114 / 414843 ZFINID:ZDB-GENE-040813-1 Length:221 Species:Danio rerio


Alignment Length:178 Identity:43/178 - (24%)
Similarity:68/178 - (38%) Gaps:40/178 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RRQIGHTSGHCNVRCDGCGNN-RMTFYRYKCLHCLDYDLCSDCKENGVSNGLHSL--DHP--LQC 77
            :|.||        :|.||.|. .::..|....:|..|       :|.:..|:.|:  |.|  :..
Zfish    78 KRSIG--------KCKGCKNEVLISDMRSHTGNCFKY-------QNYIQEGMKSISKDQPSIVSS 127

  Fly    78 LMDRDALELHFAGEPIPILCADSFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLS 142
            :.:|                 .:||||.|.:..|..:.|..||...|.......:||:||::|..
Zfish   128 VPNR-----------------STFTCPYCKKQNFDQDGLVEHCTSKHSREAQPVVCPICASMPWG 175

  Fly   143 QPSH-IAHIANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSS 189
            .|:: .|....||..  .|..:.|..:|.:...||......|.|.|.:
Zfish   176 DPNYKSADFFQHLRI--RHAFSYDTFVDYTTDEQAMIQEALQRSLVEN 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 12/52 (23%)
zf-Di19 99..149 CDD:428539 16/50 (32%)
rnf114NP_001001828.2 RING-HC_RNF114 19..64 CDD:438202
zf_C2HC_14 78..110 CDD:465807 11/46 (24%)
zf-Di19 133..193 CDD:428539 19/61 (31%)
Blue background indicates that the domain is not in the aligned region.

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