DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3526 and Stmn1

DIOPT Version :9

Sequence 1:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_058862.1 Gene:Stmn1 / 29332 RGDID:2992 Length:149 Species:Rattus norvegicus


Alignment Length:17 Identity:6/17 - (35%)
Similarity:9/17 - (52%) Gaps:2/17 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 EMGFSVEDLRTHCQDNH 124
            :|...:|.||.  :|.|
  Rat   115 QMAAKLERLRE--KDKH 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078
zf-Di19 99..149 CDD:283297 6/17 (35%)
Stmn1NP_058862.1 Stathmin 5..140 CDD:395674 6/17 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..149 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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