DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12498 and VIP5

DIOPT Version :10

Sequence 1:NP_570030.1 Gene:CG12498 / 31272 FlyBaseID:FBgn0040356 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_176299.1 Gene:VIP5 / 842395 AraportID:AT1G61040 Length:643 Species:Arabidopsis thaliana


Alignment Length:161 Identity:39/161 - (24%)
Similarity:76/161 - (47%) Gaps:9/161 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DLPVTSRDQLELLRLSRHRIGLLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAEVLGI--CELD 110
            |:| |..|..| :.:.|.::...|:.|.||:.:.||||||.:......|.:|:..|..:  .:.|
plant   260 DVP-TFEDVKE-VTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPD 322

  Fly   111 FGYKVEQIPTNVALRLRY--DDLEMQHEINDVSNLNFTQEEFELWRDNCVNQAISPPTTHILTRK 173
            ..||:|...|:..|.:.:  :....:.::..:|:.:..:||:..|...........||...::.|
plant   323 KTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEK 387

  Fly   174 K--VELYNALQLEAKPL-SLIQRTFSFALRP 201
            |  ::..|:....|:.: .::|...|.::||
plant   388 KEAIQRTNSFVYSAETVKQMLQEKKSASVRP 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12498NP_570030.1 Plus3 51..157 CDD:197843 27/109 (25%)
VIP5NP_176299.1 COG5296 70..516 CDD:227615 39/161 (24%)
Plus3 261..372 CDD:197843 28/112 (25%)

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