Protein Alignment CG12498 and Rtf1

DIOPT Version :10

• Sequence 1: NP_570030.1
• Gene: CG12498 / 31272
• FlyBaseID: FBgn0040356
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: NP_611665.1
• Gene: Rtf1 / 37554
• FlyBaseID: FBgn0034722
• Length: 775
• Species: Drosophila melanogaster
• Alignment Length: 124
• Identity: 28/124 - (22%)
• Similarity: 42/124 - (33%)
• Gaps: 37/124 - (29%)

  Fly   117 TANENWNQTRIPVYLAHTPAGSSSNVMAHLDQMFSYGGVPTFDMGEEKNLKAYGQKLPPQYNFTG 181
            |..|...:.|||..|       ..:....||.:....|: ||                |.|.::|
  Fly   440 TGYEKEKEPRIPYSL-------PKSTFERLDLLKKPNGL-TF----------------PMYKYSG 480

  Fly   182 IAD----VPIYLFWSDDDWLSTKQDLEETLF-AQLNSQVVQGSFRIENYN----HLHFI 231
            |..    :|:.|...:    :..:.|..|.| |||....:..|...|:..    |.||:
  Fly   481 IEPNNFALPLLLPGLE----AVNRTLYSTPFPAQLLPSSLYPSVSSESTTVPMFHTHFL 535

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12498	NP_570030.1	Plus3	51..157	CDD:197843	9/39 (23%)
Rtf1	NP_611665.1	COG5296	<433..677	CDD:227615	28/124 (23%)
		Plus-3	434..534	CDD:460817	26/121 (21%)