Protein Alignment CG12498 and Rtf1

DIOPT Version :9

• Sequence 1: NP_570030.1
• Gene: CG12498 / 31272
• FlyBaseID: FBgn0040356
• Length: 261
• Species: Drosophila melanogaster
• Sequence 2: XP_006234845.1
• Gene: Rtf1 / 366169
• RGDID: 1310654
• Length: 715
• Species: Rattus norvegicus
• Alignment Length: 197
• Identity: 54/197 - (27%)
• Similarity: 92/197 - (46%)
• Gaps: 20/197 - (10%)

  Fly     4 QRSRHVRRPAAEIVRELRNLRASPLRIDDENE-------------------SWVNGYEKPPTPDL 49
            :|.:...| .||::.:.:.|:.|.:..|||.|                   ......|:.|....
  Rat   293 EREKRKNR-TAELLAKKQPLKTSEVYSDDEEEEDDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQ 356

  Fly    50 PVTSRDQLELLRLSRHRIGLLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAEVLGICELDFGYK 114
            ||:..::|..:|||||::......|.|.:.|||||||:.:......|.:|:||:.|:.|....|:
  Rat   357 PVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQ 421

  Fly   115 VEQIPTNVALRLRYDDLEMQHEINDVSNLNFTQEEFELWRDNCVNQAISPPTTHILTRKKVELYN 179
            :....||..|:||:.:.:....:..|||..||:.||..|::...:..:..||...:.:|:..:..
  Rat   422 LGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKEFSIKE 486

  Fly   180 AL 181
            ||
  Rat   487 AL 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12498	NP_570030.1	Plus3	51..157	CDD:197843	36/105 (34%)
Rtf1	XP_006234845.1	COG5296	194..628	CDD:227615	54/197 (27%)
		Plus-3	364..464	CDD:397304	35/99 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5296
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003630
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810