DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG1

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_024307909.1 Gene:ABCG1 / 9619 HGNCID:73 Length:786 Species:Homo sapiens


Alignment Length:597 Identity:199/597 - (33%)
Similarity:329/597 - (55%) Gaps:37/597 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQAR 174
            |.|||.:.|....|||:|:||.|||||:||:|.||.....|::    |..|:||.|.|.:..:..
Human   206 KTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETGMK----GAVLINGLPRDLRCFRKV 266

  Fly   175 CAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVK 239
            ..|:.|||:.:..||.:|.::..|.:::......|:.:  |.:::..|.|..|.:|      |..
Human   267 SCYIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEGRREM--VKEILTALGLLSCANT------RTG 323

  Fly   240 GLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSEL 304
            .||||:|||||.|.|.:.:||::..|||||||||.:...||.::|.|:|.|:::|.||||||::|
Human   324 SLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIICTIHQPSAKL 388

  Fly   305 FELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAK 369
            |||||::.::::|:..:.|.....|.:...:|..|||.:|||||   |:.|..|...:...|:.:
Human   389 FELFDQLYVLSQGQCVYRGKVCNLVPYLRDLGLNCPTYHNPADF---VMEVASGEYGDQNSRLVR 450

  Fly   370 -----ICDN--------------FAISKVARDMEQLLATKNLEKPLEQPENGYTYKATWFMQFRA 415
                 :||:              |...:.:.:::|....|.|.|.....|..:::.|:...||..
Human   451 AVREGMCDSDHKRDLGGDAEVNPFLWHRPSEEVKQTKRLKGLRKDSSSMEGCHSFSASCLTQFCI 515

  Fly   416 VLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFA 480
            :..|::||::::.:|..:|:.....:.:||||::||.......|::.:|.:|..:..:.|..:..
Human   516 LFKRTFLSIMRDSVLTHLRITSHIGIGLLIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMP 580

  Fly   481 TINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNC 545
            |:..|..|:.||:||..:..|....|:|.||:|::|..:..|:.:.:|.|.|....:..:.|...
Human   581 TVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDAVRFVLF 645

  Fly   546 LALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWF 610
            .||.|:.:.|:.|.|.||..||:|..:|..|||...||.|||.|||::..::|.||:|:||:|:.
Human   646 AALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFDTIPTYLQWMSYISYV 710

  Fly   611 RYANEGLLINQWADVEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLA 675
            ||..||::::.:. ::..::.|....|......:.||..|:...|.|.||::.|.|..:|.|::|
Human   711 RYGFEGVILSIYG-LDREDLHCDIDETCHFQKSEAILRELDVENAKLYLDFIVLGIFFISLRLIA 774

  Fly   676 YLALR--LRARR 685
            |..||  :||.|
Human   775 YFVLRYKIRAER 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 199/597 (33%)
ABCG1XP_024307909.1 3a01204 202..786 CDD:273361 198/595 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141412
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.680

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