DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and pstB

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_418181.1 Gene:pstB / 948240 ECOCYCID:EG10783 Length:257 Species:Escherichia coli


Alignment Length:199 Identity:52/199 - (26%)
Similarity:85/199 - (42%) Gaps:26/199 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 HLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARC 175
            |.|||:.......::.|.:|.||.||:|||...........:....|..||:|..:...      
E. coli    24 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTN------ 82

  Fly   176 AYVQQDDLFIGSLTAREHLIFQAMVRMPR----HLTYRQRV------ARVDQVIQELSLSKC--- 227
               .||   |..|.|:..::||.....|.    ::.:..|:      |.:|:.:| .:|:|.   
E. coli    83 ---SQD---IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQ-WALTKAALW 140

  Fly   228 QHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKT 292
            ..|...:......||||:::||..|......|.:|:.|||.|.||..:...:.:::.:|.|....
E. coli   141 NETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTV 205

  Fly   293 VILT 296
            ||:|
E. coli   206 VIVT 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 52/199 (26%)
pstBNP_418181.1 PstB 1..257 CDD:440734 52/199 (26%)

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