DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and afuC

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_414796.2 Gene:afuC / 947676 ECOCYCID:EG12340 Length:348 Species:Escherichia coli


Alignment Length:243 Identity:67/243 - (27%)
Similarity:119/243 - (48%) Gaps:33/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 GELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQAR--CAYVQQDDLFI 185
            |:::.::|.||.||||:|..:|     |::....|...::|:.|..:.:|.|  |...|...|| 
E. coli    32 GQMVTLLGPSGCGKTTILRLVA-----GLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQSYALF- 90

  Fly   186 GSLTAREHLIF-QAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGR-VKGLSGGERKR 248
            ..::..|::.: ..|:.:||    .:..|||.:.:..:.|.       |...| |..:|||:::|
E. coli    91 PHMSLGENVGYGLKMLGVPR----AELKARVKEALAMVDLE-------GFEDRFVDQISGGQQQR 144

  Fly   249 LAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILL 313
            :|.|...:..|.:|:.|||.|.||:....|:...:::|.::.....|.:....||.|.:.|.:|:
E. coli   145 VALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAVSDTVLV 209

  Fly   314 MAEGRVAFLGTPSE-----AVDFF-SYVGAQCPTNYNPADF---YVQV 352
            |.:|.:..:|:|.:     |..|. |::|   ..|..||.|   ||.:
E. coli   210 MNKGHIMQIGSPQDLYRQPASRFMASFMG---DANLFPATFSDGYVDI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 67/243 (28%)
afuCNP_414796.2 fbpC 1..348 CDD:183133 67/243 (28%)

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