DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and artP

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_415385.1 Gene:artP / 945489 ECOCYCID:EG11624 Length:242 Species:Escherichia coli


Alignment Length:225 Identity:54/225 - (24%)
Similarity:97/225 - (43%) Gaps:47/225 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 GELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGS 187
            ||.|.::|.|||||::||..|..     :::..||...:.|...|..:..:        |..|..
E. coli    28 GETLVLLGPSGAGKSSLLRVLNL-----LEMPRSGTLNIAGNHFDFTKTPS--------DKAIRD 79

  Fly   188 LTAREHLIFQAMVRMPRHLTYRQR----------------VARVDQVIQELSLSKCQ-----HTI 231
            |.....::||.....| |||.:|.                :||.:::::.|.|....     |  
E. coli    80 LRRNVGMVFQQYNLWP-HLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLH-- 141

  Fly   232 IGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILT 296
                     ||||:::|:|.|...:.:|.:|:.||||:.||......:|.::::|::...|.::.
E. coli   142 ---------LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIV 197

  Fly   297 IHQPSSELFELFDKILLMAEGRVAFLGTPS 326
            .|:..... :...:::.|..|.:...|..|
E. coli   198 THEVEVAR-KTASRVVYMENGHIVEQGDAS 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 54/225 (24%)
artPNP_415385.1 artP 1..242 CDD:182980 54/225 (24%)

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