DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and PDR11

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_012252.1 Gene:PDR11 / 854802 SGDID:S000001275 Length:1411 Species:Saccharomyces cerevisiae


Alignment Length:679 Identity:174/679 - (25%)
Similarity:270/679 - (39%) Gaps:166/679 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NYGTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGS-------------------GWR 89
            |.|...|.:|..:..:.|..:..    ..|..|....:..|..                   .|:
Yeast   694 NDGVCTPKTPIANFSTSSSSVPS----VSHQYDTDYNIKHPDETVNNHTKESVAMETQKHVISWK 754

  Fly    90 QLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVS 154
            . :|.|.|           .|.|:.:..|....| |.|:||.||||||||||.|:.|:..|:   
Yeast   755 N-INYTIG-----------DKKLINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGV--- 803

  Fly   155 PSGMRLLNGQP---VDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVD 216
            .:|..|::|||   :||  .:....:|||.|:.:..||.||.|....::|......|...|:   
Yeast   804 VTGELLIDGQPLTNIDA--FRRSIGFVQQQDVHLELLTVRESLEISCVLRGDGDRDYLGVVS--- 863

  Fly   217 QVIQELSLSKCQHTIIGVPGR--VKGLSGGERKRLAFASEALTDPPLLI-CDEPTSGLDSFTAHS 278
                         .::.:|..  |..||..:||.|:...|.:|.|.||: .||||||||:..|.:
Yeast   864 -------------NLLRLPSEKLVADLSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALT 915

  Fly   279 VVQVLKKLSQKGKTVILTIHQPSSELFELFDKI-LLMAEGRVAFLGTPSEAVDFFSYVGAQCPTN 342
            :||.|||||.:|:.::.||||||..:...||.| ||...|...:.|:...|.|:|  |.......
Yeast   916 IVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLLKRGGECVYFGSLPNACDYF--VAHDRRLT 978

  Fly   343 Y-----NPADFYVQVLAV----VPGREIESRDRIAKICDNFAISK-------------------V 379
            :     |||||.:.|:..    :|..:.| :...:||.:..:..|                   |
Yeast   979 FDREMDNPADFVIDVVGSGSTNIPMDDAE-KPTSSKIDEPVSYHKQSDSINWAELWQSSPEKVRV 1042

  Fly   380 ARDMEQLLATKNLEKPLEQPENGYTYKA------TWFMQFRAVLWRSWLSVLKEPLLVKVRLIQT 438
            |.|:  ||    ||:  |..::|..:..      ::..|.:.:..|.::...::...|..:....
Yeast  1043 ADDL--LL----LEE--EARKSGVDFTTSVWSPPSYMEQIKLITKRQYICTKRDMTYVFAKYALN 1099

  Fly   439 TMVAILIGLIFLGQQLTQVGVMNING---AIFLF---------LTNMTFQNVFATINVFTSELPV 491
            ....:.||..|...:      .||||   ||||.         |.|........:..|:.:    
Yeast  1100 AGAGLFIGFSFWRTK------HNINGLQDAIFLCFMMLCVSSPLINQVQDKALQSKEVYIA---- 1154

  Fly   492 FMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLR-----AGVLHFFNCLALVTL 551
              |||||..|......:.:||.||||.::...:|....|...|..     |||. :.|.:    |
Yeast  1155 --REARSNTYHWTVLLIAQTIVELPLAISSSTLFFLCCYFCCGFETSARVAGVF-YLNYI----L 1212

  Fly   552 VANVSTSFG-YLISCASSSTSMALSVG---------PPVIIPFLLFGGFFLNSGSVPVYLKWLSY 606
            .:....||| :|:..|....:.|:.|.         ..|:.|:.||..|:       .::..:|.
Yeast  1213 FSMYYLSFGLWLLYSAPDLQTAAVFVAFLYSFTASFCGVMQPYSLFPRFW-------TFMYRVSP 1270

  Fly   607 LSWFRYANEGLLINQWADVEPGEISCTSS 635
            .::|......||::.      .|::|::|
Yeast  1271 YTYFIETFVSLLLHD------REVNCSTS 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 169/655 (26%)
PDR11NP_012252.1 3a01205 56..1381 CDD:273362 174/679 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341561
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
32.930

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