DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and ABCG13

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_175557.1 Gene:ABCG13 / 841571 AraportID:AT1G51460 Length:678 Species:Arabidopsis thaliana


Alignment Length:634 Identity:183/634 - (28%)
Similarity:303/634 - (47%) Gaps:93/634 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQ-A 173
            |.||..|.|...|..:||:||.||:||:|||:|||.|....:.:  ||..|:||:   .:.:. .
plant    28 KRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVM--SGKVLVNGK---KRRLDFG 87

  Fly   174 RCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRV 238
            ..|||.|:|:.:|:||.||.:.:.|.:|:|..||..:....|:..|.::.|.:|....|| ...:
plant    88 AAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIG-NWHL 151

  Fly   239 KGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSE 303
            :|:||||:|||:.|.|.||.|.||..|||||||||.:|..|||:|:.::..||||:.:|||||.|
plant   152 RGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVVQILRNIASSGKTVVSSIHQPSGE 216

  Fly   304 LFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAV----VPGREIESR 364
            :|.|||.:||::.|...:.|....|..||...|..||:..||:|.:::.:..    |....:|||
plant   217 VFALFDDLLLLSGGETVYFGEAESATKFFGEAGFPCPSRRNPSDHFLRCVNSDFDNVTAALVESR 281

  Fly   365 DRIAKICDNFAISKVARDMEQLLATKNLEKPLEQ------------------------------- 398
                      .|:..:..:.||..|.|...||:.                               
plant   282 ----------RINDSSFSLHQLHETTNTLDPLDDIPTAEIRTTLVRKFKCSLYAAASRARIQEIA 336

  Fly   399 ------PENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQV 457
                  .|.....:..|:.|.|.:..||::::.::.....:|:....:::|.:|.||........
plant   337 SIVGIVTERKKGSQTNWWKQLRILTQRSFINMSRDLGYYWMRIAVYIVLSICVGSIFFNVGRNHT 401

  Fly   458 GVMN---INGAIFLFLTNMT---FQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELP 516
            .||:   ..|.:..|:|.|:   ||:       |..|:.||.||..:..|....|.:...::.||
plant   402 NVMSTAACGGFMAGFMTFMSIGGFQS-------FIEEMKVFSRERLNGHYGVAVYTVSNLLSSLP 459

  Fly   517 LFLTVPLVFTAIAYPMIGLRAGVLHFF-NCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPV 580
            ..:.:.|..::|...|:..::|..||| |||.|:..:..|.:.. .:|:....:..|.:.:|...
plant   460 FIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCM-MMIASVVPNFLMGVMLGAGY 523

  Fly   581 IIPFLLFGGFFLNSGSVPVYLKW---LSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCP-- 640
            |...:|..|||.....:|:.. |   :||:::..:|.:|...|:...||        .::..|  
plant   524 IGIMVLSAGFFRFFPDLPMVF-WRYPVSYINYGAWALQGAYKNEMIGVE--------YDSPLPLV 579

  Fly   641 --SSGKVILET---LNFSAADLPLDYVGLAILIVSFRVLAYLALRLRAR 684
              ..|::||:|   :|..::.. ||...:.::::.:|:..:..|:.|.:
plant   580 PKMKGELILQTVLGINPESSKW-LDLAVVMMILIGYRIAFFAILKFREK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 183/634 (29%)
ABCG13NP_175557.1 3a01204 27..627 CDD:273361 183/632 (29%)

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