DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment w and ABCG30

DIOPT Version :9

Sequence 1:	NP_476787.1	Gene:	w / 31271	FlyBaseID:	FBgn0003996	Length:	687	Species:	Drosophila melanogaster
Sequence 2:	NP_001319944.1	Gene:	ABCG30 / 827187	AraportID:	AT4G15230	Length:	1400	Species:	Arabidopsis thaliana

Alignment Length:	661	Identity:	184/661 - (27%)
Similarity:	313/661 - (47%)	Gaps:	101/661 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    51 PSPPEDSGSGSGQLA---ENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPAPRKHL 112
            |.|...|.:.:|::.   :.||..:.|:..:  :..|....||                     |
plant   786 PCPKITSRAKTGKIILPFKPLTVTFQNVQYY--IETPQGKTRQ---------------------L 827

  Fly   113 LKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCA- 176
            |.::.|...||.|.::||.|||||||||:.|:.|..:||   ..|...:.|.| ..:|..||.:
plant   828 LSDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGI---IKGEIKVGGYP-KVQETFARVSG 888

  Fly   177 YVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGL 241
            |.:|.|:...::|..|.|.:.|.:|:|.::..:.:...|.:|::.:.|...:.:::|:|| :.||
plant   889 YCEQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELVKEVLETVELDDIKDSVVGLPG-ISGL 952

  Fly   242 SGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFE 306
            |..:||||..|.|.:.:|.::..||||:|||:..|..|::.:|.:::.|:||:.||||||.::||
plant   953 SIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFE 1017

  Fly   307 LFDKILLMAE-GRVAFLGTP----SEAVDFF-SYVG-AQCPTNYNPADFYVQVLAVVPGREIESR 364
            .||:::||.. |::.:.|.|    |:.:::| |:.| .:...|.|||.:.:         :|.|:
plant  1018 TFDELILMKNGGQLVYYGPPGQNSSKVIEYFESFSGLPKIQKNCNPATWIL---------DITSK 1073

  Fly   365 DRIAKICDNFAISKVARD----------MEQLLATKNLEKPLEQPENGYTYKATWFMQFRAVLWR 419
            ....|:..:|  |:..:|          :|||.:.....:.|..|..   :..|.::|.:|.||:
plant  1074 SAEEKLGIDF--SQSYKDSTLYKQNKMVVEQLSSASLGSEALRFPSQ---FSQTAWVQLKACLWK 1133

  Fly   420 SWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQ---LTQVGVMNINGAIFLFLTNMTFQNVFAT 481
            ...|..:.|.....|::...:.:.|.||:|..:.   ..|..:::|.|:::..:......|..|.
plant  1134 QHYSYWRNPSHNITRIVFILLDSTLCGLLFWQKAEDINNQQDLISIFGSMYTLVVFPGMNNCAAV 1198

  Fly   482 INVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCL 546
            ||...:|..||.||..:|:|....|...:.:.|:|..|...|:.|.|.||.||....|...|..|
plant  1199 INFIAAERNVFYRERFARMYSSWAYSFSQVLIEVPYSLLQSLLCTIIVYPTIGYHMSVYKMFWSL 1263

  Fly   547 ALV---TLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLS 608
            ..:   .|:.|.|   |.|:...:.:..||:::.........||.||.:....:|.:..|:.|||
plant  1264 YSIFCSLLIFNYS---GMLMVALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLS 1325

  Fly   609 WFRYANEGLLINQWADVEP-----GEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGL---A 665
            ...:..||||.:|:.||:.     ||....|:          .||           ||.|.   :
plant  1326 PTSWVLEGLLSSQYGDVDKEILVFGEKKRVSA----------FLE-----------DYFGYKHES 1369

  Fly   666 ILIVSFRVLAY 676
            :.:|:|.::||
plant  1370 LAVVAFVLIAY 1380

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
w	NP_476787.1	3a01204	68..687	CDD:273361	180/641 (28%)
ABCG30	NP_001319944.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X52
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	4	3.870