DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG19

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_191073.1 Gene:ABCG19 / 824679 AraportID:AT3G55130 Length:725 Species:Arabidopsis thaliana


Alignment Length:658 Identity:197/658 - (29%)
Similarity:314/658 - (47%) Gaps:112/658 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPV-DAKEMQA 173
            |.||.:|.|.|..|::|||:|:|||||:||::|||.|..:|   |..|...|||:.| .::.::.
plant    97 KTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEG---SLRGSVTLNGEKVLQSRLLKV 158

  Fly   174 RCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRV 238
            ..|||.||||....||.:|.|:|.:..|:||.|:..:::.||:.:|.:|.|....:|:||..|. 
plant   159 ISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGH- 222

  Fly   239 KGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSE 303
            :|:|||||:|::...:.:.||.:|..|||||||||..|..||||||:::|.|..||::|||||:.
plant   223 RGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVIMSIHQPSAR 287

  Fly   304 LFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL-----------AVVP 357
            :.||.|::::::.|:..|.|:|:....|||..|...|...|.::|.:.::           |:|.
plant   288 IVELLDRLIILSRGKSVFNGSPASLPGFFSDFGRPIPEKENISEFALDLVRELEGSNEGTKALVD 352

  Fly   358 GREIESRDRIAKICDNFAISKVARDME--------------QLLATKNLEKPLEQPENGYTYK-- 406
            ..|...:::|:.|......:|:.:|..              :|::..:...|... |...:|.  
plant   353 FNEKWQQNKISLIQSAPQTNKLDQDRSLSLKEAINASVSRGKLVSGSSRSNPTSM-ETVSSYANP 416

  Fly   407 ---ATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFL 468
               .|:.:..|.:  ::|   ::.|.||..|:....:...|:..::.....|..|... ...:|.
plant   417 SLFETFILAKRYM--KNW---IRMPELVGTRIATVMVTGCLLATVYWKLDHTPRGAQE-RLTLFA 475

  Fly   469 FLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMI 533
            |:....|......:.||..|..:|:||.....||..:|.:..::..||..|...|||:||.:..:
plant   476 FVVPTMFYCCLDNVPVFIQERYIFLRETTHNAYRTSSYVISHSLVSLPQLLAPSLVFSAITFWTV 540

  Fly   534 GLRAGVLHF-FNCL----------ALVTLVANV--------STSFGYLISCASSSTSMALSVGPP 579
            ||..|:..| |.||          ::||.::.|        ..|..||..|              
plant   541 GLSGGLEGFVFYCLLIYASFWSGSSVVTFISGVVPNIMLCYMVSITYLAYC-------------- 591

  Fly   580 VIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWAD-----VEPGEISCTSSNTTC 639
                 ||..||::|...:|.|..|..|:|..:|..|.:|||::.|     |...::..::.....
plant   592 -----LLLSGFYVNRDRIPFYWTWFHYISILKYPYEAVLINEFDDPSRCFVRGVQVFDSTLLGGV 651

  Fly   640 PSSGKV-ILETLNFS-------------AADLPLDYVGLAILI------------VSFRVLAYLA 678
            ..|||| :||||:.|             .:|| |...|:..|.            :.||:|.|.|
plant   652 SDSGKVKLLETLSKSLRTKITESTCLRTGSDL-LAQQGITQLSKWDCLWITFASGLFFRILFYFA 715

  Fly   679 LRLRARRK 686
            |...:|.|
plant   716 LLFGSRNK 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 197/658 (30%)
ABCG19NP_191073.1 P-loop_NTPase 89..307 CDD:304359 94/213 (44%)
3a01204 90..724 CDD:273361 197/658 (30%)
ABC2_membrane 424..627 CDD:279410 56/227 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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