DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG16

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_191069.2 Gene:ABCG16 / 824675 AraportID:AT3G55090 Length:736 Species:Arabidopsis thaliana


Alignment Length:692 Identity:195/692 - (28%)
Similarity:315/692 - (45%) Gaps:106/692 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGS 131
            ||||   |:.:...::     :..||...|..|       :..|.||.|:.|....||:|||:|:
plant    77 NLTY---NVSVRRKLD-----FHDLVPWRRTSF-------SKTKTLLDNISGETRDGEILAVLGA 126

  Fly   132 SGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIF 196
            ||:||:||::|||.|..:|   |..|...|||:.:.::.::...|||.||||....||..|.|:|
plant   127 SGSGKSTLIDALANRIAKG---SLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMF 188

  Fly   197 QAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPL 261
            .|..|:||.|...::..||..:|.:|.:.....||||..|. :|:|||||:|::...:.:.||.:
plant   189 AAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGH-RGISGGERRRVSIGIDIIHDPIV 252

  Fly   262 LICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPS 326
            |..|||||||||.:|..||:|||::::.|..:|::|||||..:..|.|:::.::.|...|.|:|:
plant   253 LFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSPA 317

  Fly   327 EAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKN 391
            ....||:..|...|.|.|..:|.:.::..:.|....:|..:       ..:|..::|::....:.
plant   318 SLPSFFAGFGNPIPENENQTEFALDLIRELEGSAGGTRGLV-------EFNKKWQEMKKQSNPQT 375

  Fly   392 LEKPLEQPENGYTYKAT------------------------------------WFMQFRAVLWRS 420
            |..| ..|....|.|..                                    ::::.:.:..||
plant   376 LTPP-ASPNPNLTLKEAISASISRGKLVSGGGGGSSVINHGGGTLAVPAFANPFWIEIKTLTRRS 439

  Fly   421 WLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVF 485
            .|:..::|.|:.:||....:...::..:|.....:..||....| .|.|..:..|......:.||
plant   440 ILNSRRQPELLGMRLATVIVTGFILATVFWRLDNSPKGVQERLG-FFAFAMSTMFYTCADALPVF 503

  Fly   486 TSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHF-FNCLALV 549
            ..|..:||||.....||..:|.|...|...|..:.:.|.|....:..:||..|::.| |.||.::
plant   504 LQERYIFMRETAYNAYRRSSYVLSHAIVTFPSLIFLSLAFAVTTFWAVGLEGGLMGFLFYCLIIL 568

  Fly   550 TLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYAN 614
            ....: .:||...:|.......:..::...::..||||.|||:|...:|.|..|..|||..:|..
plant   569 ASFWS-GSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPQYWIWFHYLSLVKYPY 632

  Fly   615 EGLLINQWADVEPGE--------------------------------ISCTSSNTTCPSSGKVIL 647
            |.:|.|:::|  |.|                                |....|::||.::|..:|
plant   633 EAVLQNEFSD--PTECFVRGVQLFDNSPLGELTYGMKLRLLDSVSRSIGMRISSSTCLTTGADVL 695

  Fly   648 E---TLNFSAADLPLDYVGLAILIVSFRVLAYLALRLRARRK 686
            :   ....|..:..|..||...|   ||:|.||.|.|.::.|
plant   696 KQQGVTQLSKWNCLLITVGFGFL---FRILFYLCLLLGSKNK 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 194/691 (28%)
ABCG16NP_191069.2 3a01204 75..735 CDD:273361 195/692 (28%)
P-loop_NTPase 85..314 CDD:304359 93/244 (38%)
ABC2_membrane 435..638 CDD:279410 56/204 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

Return to query results.
Submit another query.