DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and ABCG20

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:635 Identity:188/635 - (29%)
Similarity:294/635 - (46%) Gaps:79/635 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMR---LLNGQPVDAKEM 171
            |.||..:.|.|..||::||:|:||:||:||::|||.|      :|...:|   .|||:.:::...
plant   124 KVLLNGISGEAREGEMMAVLGASGSGKSTLIDALANR------ISKESLRGDITLNGEVLESSLH 182

  Fly   172 QARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPG 236
            :...|||.||||....||..|.|:|.|..|:|..|:.:::.|||..:|.:|.|.....|:||..|
plant   183 KVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEG 247

  Fly   237 RVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPS 301
            . :|:|||||:|::..::.:.||.:|..|||||||||.:|:.||:||::::|.|..||::|||||
plant   248 H-RGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPS 311

  Fly   302 SELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDR 366
            ..:..|.||::.::.|...:.|:|:....|||..|...|.|.|..:|.:.::     ||:|....
plant   312 YRILGLLDKLIFLSRGNTVYSGSPTHLPQFFSEFGHPIPENENKPEFALDLI-----RELEDSPE 371

  Fly   367 IAKICDNFAISKVARDMEQLLATKNLEKPLEQP----------ENGYTYKATWFMQFRAVLW--- 418
            ..|....|.....|:.... .:.:|....|:..          .:|.|...:.|..|....|   
plant   372 GTKSLVEFHKQWRAKQTSS-QSRRNTNVSLKDAISASISRGKLVSGATNLRSSFQTFANPFWTEM 435

  Fly   419 -----RSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNV 478
                 ||.|:..::|.|..:||....:..:::..||.....:..|:....| .|.|..:.||...
plant   436 LVIGKRSILNSRRQPELFGIRLGAVLVTGMILATIFWKLDNSPRGIQERLG-FFAFAMSTTFYTC 499

  Fly   479 FATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAG----V 539
            ...|.||..|..:||||.....||..:|.|..||..:|..:.:...|.|..:..:||..|    :
plant   500 AEAIPVFLQERYIFMRETAYNAYRRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGSEGFL 564

  Fly   540 LHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWL 604
            ..||..|....    ..:||...:|...|...:..:|...::..||||.|||::...:|:|..|.
plant   565 FFFFTILTAFW----AGSSFVTFLSGVVSHVMIGFTVVVAILAYFLLFSGFFISRDRIPLYWIWF 625

  Fly   605 SYLSWFRYANEGLLINQWADVE------------------------------PGEISCTSSNTTC 639
            .|||..:|..||:|.|::.|..                              .|.:....:..||
plant   626 HYLSLVKYPYEGVLQNEFEDPTKCFVRGIQMFDNSPLGQVPTAVKISLLKSMSGVLGINVTAETC 690

  Fly   640 PSSGKVILETLNFSAADLPLDYVGLAILIV---SFRVLAYLALRLRARRK 686
            .::|..||:....:...   .:..|.|.:.   .||||.|..|.:.::.|
plant   691 VTTGIDILKQQGITEIS---KWNCLWITVAWGFFFRVLFYFTLLIGSKNK 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 188/635 (30%)
ABCG20NP_190919.1 3a01204 120..738 CDD:273361 188/635 (30%)

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