DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG38

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001319673.1 Gene:ABCG38 / 822863 AraportID:AT3G30842 Length:1418 Species:Arabidopsis thaliana


Alignment Length:685 Identity:173/685 - (25%)
Similarity:297/685 - (43%) Gaps:99/685 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KNYGTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPA 107
            |.||..:....|::.............|....|:.|..        |.:..||    ||::.:..
plant   762 KQYGISKTAVLPDEREEADSNNTTGRDYTGTTMERFFD--------RVVTTRT----CNDKKLRI 814

  Fly   108 PRKH-----------------------------LLKNVCGVAYPGELLAVMGSSGAGKTTLLNAL 143
            |.|.                             ||..:.|...||.|.|:||.||||||||::.|
plant   815 PFKPLYMTFENITYSVDTPKEMKEKGIRENKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVL 879

  Fly   144 AFRSPQG-IQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLT 207
            |.|...| ||    |...::|.|...........|.:|.|:....||..|.|::.|.:|:|..:.
plant   880 AGRKNTGYIQ----GEIYVSGFPKKQDSFARVSGYCEQSDIHSPLLTVYESLLYSAWLRLPPDID 940

  Fly   208 YRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLD 272
            ...|...:::|::.:.|...:..::|..| :.|||..:|||:..|.|.:.:|.:|..||||||||
plant   941 THTRELFIEEVMELIELKALREMLVGYVG-ISGLSTEQRKRMTIAVELVANPSILFMDEPTSGLD 1004

  Fly   273 SFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTP-----SEAVDFF 332
            :..|..|::.::.....|:||:.||||||.::||.||::.|:..|.......|     |:.:::|
plant  1005 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFLLTRGGEEIYVGPIGHHSSQLIEYF 1069

  Fly   333 SYVG--AQCPTNYNPADFYVQVLAVVPGREIESRDRIAKI--CDNFAISKVARDMEQLLATKNLE 393
            ..:.  .:....||||.:.::|..       .:::.:..:  ...:..|.:.|..:.|:...|..
plant  1070 EGIRGVGKIKEGYNPATWALEVTT-------RAQEDVLGVTFAQVYKKSNLYRRNKDLIKELNNI 1127

  Fly   394 KPLEQPENGYT-YKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIF--LGQQL- 454
            .|..|..:..| |..::..||:|.||:...|..:......||......|.|:.|:||  ||::. 
plant  1128 PPHAQDIHFSTKYSQSYLSQFQACLWKQHKSYWRNVPYNAVRFSFGAAVGIMYGIIFWSLGKRKG 1192

  Fly   455 TQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFL 519
            |:..:.|..||:...:..::.|:......|..:|..||.|||.:.:|....|...:.|.|:|..:
plant  1193 TRQDIFNSVGAMSTVVGFLSSQSAATVRPVVIAERTVFYREAGAGMYSALPYAFSQVIIEIPYTM 1257

  Fly   520 TVPLVFTAIAYPMIGLRAGVLHFFNCL--ALVTLVANVSTSFGYLISCASSSTSMALSVGPPVII 582
            ....::..|.|.|||.......||..:  ..::::.::.|  |.::...|.:..:|..:...:..
plant  1258 AQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYT--GIMVISVSPNQEIASILNGVIST 1320

  Fly   583 PFLLFGGFFLNSGSVPVYLKWLSYLS---WFRYANEGLLINQWADVEPGEISCTSSNTTCPSSGK 644
            .:.:|.||.:....:.|:|:|.:|:.   |..|   ||.|.|:.|||           |...:|:
plant  1321 SWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLY---GLTIAQYGDVE-----------TRLDTGE 1371

  Fly   645 VILETLNFSAADLPLDYVGLA---ILIVSFRVLAY 676
            .::|.:.        :|.|..   :.:||..::|:
plant  1372 TVVEFMK--------NYYGYEYNFLWVVSLTLIAF 1398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 169/660 (26%)
ABCG38NP_001319673.1 PLN03140 5..1418 CDD:215599 173/685 (25%)

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