DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG21

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001189973.1 Gene:ABCG21 / 822149 AraportID:AT3G25620 Length:672 Species:Arabidopsis thaliana


Alignment Length:658 Identity:204/658 - (31%)
Similarity:344/658 - (52%) Gaps:101/658 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ENLTYAWHNMDIFGAVNQPGSG--WRQLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAV 128
            |.|||:        ..:|.|.|  |          |.::.  |.|.:.:||.|.|:..||||||:
plant    71 EELTYS--------IKSQTGKGSYW----------FGSQE--PKPNRLVLKCVSGIVKPGELLAM 115

  Fly   129 MGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREH 193
            :|.||:|||||:.|||.|    :|...||....||:|. ...::.:..:|.|||:....||..|.
plant   116 LGPSGSGKTTLVTALAGR----LQGKLSGTVSYNGEPF-TSSVKRKTGFVTQDDVLYPHLTVMET 175

  Fly   194 LIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTD 258
            |.:.|::|:|:.||.::::.:|:.|:.:|.|::|.:::|| .|.::|:|||||||::...|.|.:
plant   176 LTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIG-GGLIRGISGGERKRVSIGQEMLVN 239

  Fly   259 PPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLG 323
            |.||:.|||||||||.||..:|..|:.|::.|:||:.|||||||.|:.:|||:|:::||...:.|
plant   240 PSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSRLYRMFDKVLVLSEGCPIYSG 304

  Fly   324 TPSEAVDFFSYVGAQCPTNY-NPADFYVQVLAVVPG--------REIESRDRIAKICDNFAISKV 379
            .....:::|..:|.|..::: |||||   ||.:..|        .:||:..|:.::.:..::.  
plant   305 DSGRVMEYFGSIGYQPGSSFVNPADF---VLDLANGITSDTKQYDQIETNGRLDRLEEQNSVK-- 364

  Fly   380 ARDMEQLLAT--KNLEKPLEQ------PENGYT-----------YKATWFMQFRAVLWRSWLSVL 425
                :.|:::  |||..||::      |::...           :..:|:|||..:|.|.    |
plant   365 ----QSLISSYKKNLYPPLKEEVSRTFPQDQTNARLRKKAITNRWPTSWWMQFSVLLKRG----L 421

  Fly   426 KE---PLLVKVRLIQTTMVAILIGLIFLGQQLT----QVGVMNINGAIFLFLTNMTFQNVFATIN 483
            ||   .....:|:.....|::|.||::...::.    |||:      :|.|.....|..:|..|.
plant   422 KERSHESFSGLRIFMVMSVSLLSGLLWWHSRVAHLQDQVGL------LFFFSIFWGFFPLFNAIF 480

  Fly   484 VFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLAL 548
            .|..|.|:.::|..|.:||..:|::.:|:.:||:.|.:|.:|..|.|.|.||:..:..|...|.:
plant   481 TFPQERPMLIKERSSGIYRLSSYYIARTVGDLPMELILPTIFVTITYWMGGLKPSLTTFIMTLMI 545

  Fly   549 VTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYA 613
            |.....|:...|..:.........|.::...:::.|||.||:::.  .:|.::.||.|:|:..|.
plant   546 VLYNVLVAQGVGLALGAILMDAKKAATLSSVLMLVFLLAGGYYIQ--HIPGFIAWLKYVSFSHYC 608

  Fly   614 NEGLLIN---QWADVEPGEISCTSSNTTCPSSGKVILE---TLNFSAADLPLDYVGLAILIVSFR 672
            .: ||:.   .|.:|    ..| .|...|.     :::   ..|....::..|.:.||::::.:|
plant   609 YK-LLVGVQYTWDEV----YEC-GSGLHCS-----VMDYEGIKNLRIGNMMWDVLALAVMLLLYR 662

  Fly   673 VLAYLALR 680
            ||||||||
plant   663 VLAYLALR 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 203/656 (31%)
ABCG21NP_001189973.1 PLN03211 43..670 CDD:215634 202/656 (31%)
P-loop_NTPase 89..304 CDD:304359 95/222 (43%)
ABC2_membrane 416..615 CDD:279410 56/211 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm1120
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.680

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