DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG26

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_187928.2 Gene:ABCG26 / 820512 AraportID:AT3G13220 Length:685 Species:Arabidopsis thaliana


Alignment Length:600 Identity:190/600 - (31%)
Similarity:310/600 - (51%) Gaps:47/600 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKE 170
            |...||:||.:.|...|||:||:||.||:||||||..:..|....::    |....|..|. :..
plant   100 PDGYKHILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVK----GKLTYNDIPY-SPS 159

  Fly   171 MQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVP 235
            ::.|..:|.|||:.:..||..|.|.|.|.:|:|..::..|:.|:::.:|:||.|.:|:.|.:| .
plant   160 VKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERCRRTRVG-G 223

  Fly   236 GRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQP 300
            |.|||:|||||||.:.|.|.|.||.||:.|||||||||.:|..::.:|:.:::.|:|||.|||||
plant   224 GFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQP 288

  Fly   301 SSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRD 365
            ||.:|.:|||:||::||..||.|...|::::||.:........|||:|   :|.:..|:..:   
plant   289 SSRMFHMFDKLLLISEGHPAFYGKARESMEYFSSLRILPEIAMNPAEF---LLDLATGQVSD--- 347

  Fly   366 RIAKICDNFAISKVAR-DMEQLLATKNLE-------KPLEQPENGYTYKA--------------- 407
              ..:.|....:|.|: |.|::| .|.|:       :|.|:.||....||               
plant   348 --ISLPDELLAAKTAQPDSEEVL-LKYLKQRYKTDLEPKEKEENHRNRKAPEHLQIAIQVKKDWT 409

  Fly   408 -TWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQL-TQVGVMNINGAIFLFL 470
             :|:.|| .:|.|......:.....|:||:|:..||:::||::...:. |:..:.:..|.:|...
plant   410 LSWWDQF-LILSRRTFRERRRDYFDKLRLVQSLGVAVVLGLLWWKSKTDTEAHLRDQVGLMFYIC 473

  Fly   471 TNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGL 535
            ...|..::|..:.||..|....::|.::.:||...|::..|:.::...:..|..|..|.|.|...
plant   474 IFWTSSSLFGAVYVFPFEKIYLVKERKAEMYRLSVYYVCSTLCDMVAHVLYPTFFMIIVYFMAEF 538

  Fly   536 RAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVY 600
            ...:..|...:..:.|:|..|...|..:..:..|...|..:...|::.|||.||:::.  .:|.:
plant   539 NRNIPCFLFTVLTILLIAITSQGAGEFLGASVLSIKRAGMIASLVLMLFLLTGGYYVQ--HIPKF 601

  Fly   601 LKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLA 665
            ::||.|||:..|....||..|::..:..|........|..||..  .:|:|.:.....| :|.||
plant   602 MQWLKYLSFMHYGFRLLLKVQYSADQLFECGSKGGCRTLQSSSS--FDTINLNGGLQEL-WVLLA 663

  Fly   666 ILIVSFRVLAYLALR 680
             :...:|:.||..||
plant   664 -MAFGYRLCAYFCLR 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 189/599 (32%)
ABCG26NP_187928.2 PLN03211 62..678 CDD:215634 189/599 (32%)
ABCG_EPDR 93..311 CDD:213180 97/216 (45%)
ABC2_membrane 435..621 CDD:279410 47/187 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.680

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