DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG1

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_181467.1 Gene:ABCG1 / 818520 AraportID:AT2G39350 Length:740 Species:Arabidopsis thaliana


Alignment Length:698 Identity:199/698 - (28%)
Similarity:317/698 - (45%) Gaps:106/698 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPAPR-KHLLKNVCGVAYPGELLAVM 129
            :||||   |:.:     :|...:|.|..|.|...........|: |.||.|:.|....||::||:
plant    70 DNLTY---NVSV-----RPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVL 126

  Fly   130 GSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHL 194
            |:||:||:||::|||.|..:|   |..|...|||:.:.::.::...|||.||||....||..|.|
plant   127 GASGSGKSTLIDALANRIAKG---SLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETL 188

  Fly   195 IFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDP 259
            :|.|..|:||.|...::..||..:|.:|.:.....||||..|. :|:|||||:|::...:.:.||
plant   189 MFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGH-RGISGGERRRVSIGIDIIHDP 252

  Fly   260 PLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGT 324
            .||..|||||||||.:|..||:|||:::|.|..||::|||||..:..|.|:::.::.|...:.|:
plant   253 ILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGS 317

  Fly   325 PSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLAT 389
            |:....||:..|:..|.|.|..:|.:.::..:.|....:|..|          :..:..:::...
plant   318 PASLPRFFTEFGSPIPENENRTEFALDLIRELEGSAGGTRGLI----------EFNKKWQEMKKQ 372

  Fly   390 KNLEKPLEQPENGY---TYK-----------------------AT---------------WFMQF 413
            .|.:.||..|.:.|   |.|                       ||               | ::.
plant   373 SNRQPPLTPPSSPYPNLTLKEAIAASISRGKLVSGGESVAHGGATTNTTTLAVPAFANPMW-IEI 436

  Fly   414 RAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNV 478
            :.:..||.|:..::|.|..:|:....:...::..:|.....:..||....| .|.|..:..|...
plant   437 KTLSKRSMLNSRRQPELFGIRIASVVITGFILATVFWRLDNSPKGVQERLG-FFAFAMSTMFYTC 500

  Fly   479 FATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLH-F 542
            ...:.||..|..:||||.....||..:|.|...|...|..:.:.:.|.|..|..:||..|:.. .
plant   501 ADALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVSFPSLIFLSVAFAATTYWAVGLDGGLTGLL 565

  Fly   543 FNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYL 607
            |.||.::....: .:||...:|....|..:..::...::..||||.|||:|...:|.|..|..|:
plant   566 FYCLIILASFWS-GSSFVTFLSGVVPSVMLGYTIVVAILAYFLLFSGFFINRNRIPDYWIWFHYM 629

  Fly   608 SWFRYANEGLLINQWADVEP--------------GE----------------ISCTSSNTTCPSS 642
            |..:|..|.:|.|:::|...              ||                :..|.|:|||.::
plant   630 SLVKYPYEAVLQNEFSDATKCFVRGVQIFDNTPLGELPEVMKLKLLGTVSKSLGVTISSTTCLTT 694

  Fly   643 GKVILETLNFSAADLPLDYVGLAILIVS----FRVLAYLALRLRARRK 686
            |..||.    ....:.|.......:.|:    ||:|.|..|.|.::.|
plant   695 GSDILR----QQGVVQLSKWNCLFITVAFGFFFRILFYFTLLLGSKNK 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 198/696 (28%)
ABCG1NP_181467.1 3a01204 106..739 CDD:273361 188/654 (29%)

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