DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG2

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:745 Identity:202/745 - (27%)
Similarity:327/745 - (43%) Gaps:127/745 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQL-----VNRTRGLFCNERHIPAP-- 108
            |...|..|..|.....::|:|.|.|::..|.|...:..|.|     :|.....|.:....||.  
plant    27 PMSVEPQGRPSDTTRVSVTFAEHLMNVEDARNDESASSRALGIASPINSAASSFNSWASAPASSI 91

  Fly   109 --------------------------------------RKHLLKNVCGVAYPGELLAVMGSSGAG 135
                                                  .|.||..:.|.|..||::||:|:||:|
plant    92 SSSPFVLSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSG 156

  Fly   136 KTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMV 200
            |:||::|||.|..:.   |..|...|||:.:::...:...|||.||||....||..|.|:|.|..
plant   157 KSTLIDALANRIAKD---SLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEF 218

  Fly   201 RMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICD 265
            |:||.|:.:::.|||..:|.:|.|.....|:||..|. :|:|||||:|::..::.:.||.:|..|
plant   219 RLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGH-RGVSGGERRRVSIGNDIIHDPIILFLD 282

  Fly   266 EPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVD 330
            ||||||||.:|:.|::||::::|.|..||::|||||..:..|.|:::.:::|...:.|:|:....
plant   283 EPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQ 347

  Fly   331 FFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKIC-----------------DNFAISK 378
            |||......|.|.|..:|.:.::     ||:|......|..                 :|...:.
plant   348 FFSEFKHPIPENENKTEFALDLI-----RELEYSTEGTKPLVEFHKQWRAKQAPSYNNNNKRNTN 407

  Fly   379 VARDMEQLLATKNLEKPLEQPENGYTYKAT-WFMQFRAVLW--------RSWLSVLKEPLLVKVR 434
            |:...|.:.|:.:..|.:....|..:...| .|..|....|        |:.|:..::|.|:.:|
plant   408 VSSLKEAITASISRGKLVSGATNNNSSNLTPSFQTFANPFWIEMIVIGKRAILNSRRQPELLGMR 472

  Fly   435 LIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSR 499
            |....:..|::..:|.....:..|.....| .|.|..:.||......|.||..|..:||||....
plant   473 LGAVMVTGIILATMFTNLDNSPKGAQERLG-FFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYN 536

  Fly   500 LYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVAN--VSTSFGYL 562
            .||..:|.|.::|..:|..:.:...|.|..:..:||..|...||  ....|::|:  ..:||...
plant   537 AYRRSSYVLSQSIISIPALIVLSASFAATTFWAVGLDGGANGFF--FFYFTILASFWAGSSFVTF 599

  Fly   563 ISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWA---- 623
            :|....:..:..:|...::..||||.|||::...:|||..|..|:|..:|..||:|.|::.    
plant   600 LSGVIPNVMLGFTVVVAILAYFLLFSGFFISRDRIPVYWLWFHYISLVKYPYEGVLQNEFQNPTR 664

  Fly   624 -------------------DVE-------PGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYV 662
                               ||:       .|.:....:..||.::|..||:....:      |..
plant   665 CFARGVQLFDNSPLGEFPNDVKVNLLKSMSGVLGTNVTAETCVTTGIDILKQQGIT------DIS 723

  Fly   663 GLAILIVS------FRVLAYLALRLRARRK 686
            ....|.::      ||||.|..|.:.::.|
plant   724 KWNCLWITVAWGFFFRVLFYFTLLIGSKNK 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 198/728 (27%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 186/677 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - LDO PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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