DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and NAP12

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001323430.1 Gene:NAP12 / 818275 AraportID:AT2G37010 Length:1082 Species:Arabidopsis thaliana


Alignment Length:722 Identity:175/722 - (24%)
Similarity:311/722 - (43%) Gaps:135/722 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NQGFGQAKNYGTLRPP--SPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPG-----SGWRQLVN 93
            |:||    |.||...|  .|....|......::...||:..::...|:.|..     ||...:..
plant   412 NEGF----NVGTGSKPGKKPQAPKGKQLHTQSQIFKYAYGQIEKEKAMEQNNKNLTFSGVISMAT 472

  Fly    94 ----RTR----------GLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALA 144
                |||          .|....:|     ||:|::|.|...||.:.||||.|||||||.|:|||
plant   473 DTEMRTRPVIEVAFKDLTLTLKGKH-----KHILRSVTGKIMPGRVSAVMGPSGAGKTTFLSALA 532

  Fly   145 FRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYR 209
            .::   ...:.:|:.|:||:.......:....:|.|||:..|:||..|:|.|.|..|:..:::..
plant   533 GKA---TGCTRTGLILINGRNDSINSYKKITGFVPQDDVVHGNLTVEENLRFSARCRLSAYMSKA 594

  Fly   210 QRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSF 274
            .:|..:::||:.|.|...:.:::|...: :|:|||:|||:....|.:.:|.|||.||||:||||.
plant   595 DKVLIIERVIESLGLQHVRDSLVGTIEK-RGISGGQRKRVNVGVEMVMEPSLLILDEPTTGLDSA 658

  Fly   275 TAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRV-AFLGTPSEAVDFFSYVGAQ 338
            ::..:::.|::.:.:|..:.:.:||||..::::||.::::|:|.: .:.|:..:..::|:.:|..
plant   659 SSQLLLRALRREALEGVNICMVVHQPSYTMYKMFDDMIILAKGGLTVYHGSVKKIEEYFADIGIT 723

  Fly   339 CPTNYNPADFYVQVL--AVVPGREIESRD---------------RIAKICDNFAISKV------- 379
            .|...||.|.|:.:|  .|.|..:|....               .:.|.||....|..       
plant   724 VPDRVNPPDHYIDILEGIVKPDGDITIEQLPVRWMLHNGYPVPHDMLKFCDGLPSSSTGSAQEDS 788

  Fly   380 -----ARDMEQLLATKNLEKPLEQPENGYT--------YKATWFMQFRAVLWRSWLSVLKEPLLV 431
                 :.|:.|.:.| |:|...:|.::.|:        ...|...|:|..:.|.....|:|    
plant   789 THNSFSNDLWQDVKT-NVEITKDQLQHNYSNSHDNSNRVTPTVGRQYRYFVGRVGKQRLRE---- 848

  Fly   432 KVRLIQTTMVAILIGLIFLGQQLTQVGVMNIN--GAIFLFLTNMTFQNVFATINVFTSELPVFMR 494
             .||.....:.:|:....|| .|.:|....|:  |..:..:.......:.| :..|:.:...:.|
plant   849 -ARLQALDFLILLVAGACLG-TLAKVNDETIDTLGYTYTIIAVSLLCKISA-LRSFSVDKLQYWR 910

  Fly   495 EARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFF---------NCLALVT 550
            |:.:.:... .:|:.|...:....:..|||:.::.|           ||         |.:.||.
plant   911 ESAAGISSL-AHFMAKDTMDHLNTIMKPLVYLSMFY-----------FFNNPRSSFEDNYIVLVC 963

  Fly   551 LVANVSTSFGYLISCA-SSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYAN 614
            ||..| |...|:.:.. |.|.:..|||..||::..:      .|.....:.||:|....:.::..
plant   964 LVYCV-TGMAYIFAILYSPSAAQLLSVLVPVVMTLI------ANQDKESMVLKYLGSFCYPKWTL 1021

  Fly   615 EGLLINQ-------WADVEPGEISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFR 672
            |..:::.       |.            .|.|.|     |....:..:|..|..:.|.::.:..|
plant  1022 EAFVLSNAQRYSGVWV------------VTRCSS-----LSQNGYDLSDWILCLIVLVLMGLICR 1069

  Fly   673 VLAYLAL 679
            .:||..:
plant  1070 FIAYFCM 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 166/688 (24%)
NAP12NP_001323430.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

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