DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and ABCG5

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_178984.1 Gene:ABCG5 / 815846 AraportID:AT2G13610 Length:649 Species:Arabidopsis thaliana


Alignment Length:611 Identity:165/611 - (27%)
Similarity:286/611 - (46%) Gaps:62/611 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFR-SPQGIQVSPSGMRLLNGQPVDAKEMQA 173
            ||:||.|...|.|.|:||::|.|||||::||..||.| .||      :|...:|.:|||....:.
plant    60 KHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQ------TGSVYVNKRPVDRANFKK 118

  Fly   174 RCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRV 238
            ...||.|.|.....||..|.|:|.|.:|:  .|...:..:||..::.||.|.......:| ...|
plant   119 ISGYVTQKDTLFPLLTVEETLLFSAKLRL--KLPADELRSRVKSLVHELGLEAVATARVG-DDSV 180

  Fly   239 KGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQ-KGKTVILTIHQPSS 302
            :|:|||||:|::...|.:.||.:||.|||||||||.:|..::.:||.::: :|:|:|||||||..
plant   181 RGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHMAETRGRTIILTIHQPGF 245

  Fly   303 ELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQ-VLAVVPGREIESRDR 366
            .:.:.|:.:||:|.|.....|:..:...:....|...|.:.|..:|.:: :.::...:.::...|
plant   246 RIVKQFNSVLLLANGSTLKQGSVDQLGVYLRSNGLHPPLHENIVEFAIESIESITKQQRLQESRR 310

  Fly   367 IAKIC------------DNFAISKVAR-DMEQL--------LATKNLEKPLEQPENGYTYKATWF 410
            .|.:.            |:...||..: .::||        :.|.|:.....:.......:.|..
plant   311 AAHVLTPQTTLQEKRSEDSQGESKSGKFTLQQLFQQTRVADVGTMNIATEFTRDFANSRLEETMI 375

  Fly   411 M--QFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNM 473
            :  :|...::|:     ||  |...|.:|.....|::||||...:....|.....| :|.|:...
plant   376 LTHRFSKNIFRT-----KE--LFACRTVQMLGSGIVLGLIFHNLKDDLKGARERVG-LFAFILTF 432

  Fly   474 TFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAG 538
            ...:....:.:|..|..:.|:|..|..||..:|.:...:..||..|.:.::|:...|.::||...
plant   433 LLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPS 497

  Fly   539 VLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKW 603
            .:.|.:...|:.|:...:.|.....|....:..:..||...|:..|.||.|:|:::..:|.|..:
plant   498 FMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPGYWIF 562

  Fly   604 LSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCPSSG--------KVILETLNFSAADLPLD 660
            :.|:|.|:|..||.|||::           |.:..|...|        :.:|:...:.......:
plant   563 MHYISLFKYPFEGFLINEF-----------SKSNKCLEYGFGKCLVTEEDLLKEERYGEESRWRN 616

  Fly   661 YVGLAILIVSFRVLAYLALRLRARRK 686
            .|.:...::.:|.::|:.||.|..::
plant   617 VVIMLCFVLLYRFISYVILRCRCSQR 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 165/611 (27%)
ABCG5NP_178984.1 3a01204 37..638 CDD:273361 164/605 (27%)

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