DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and abcg2d

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_009292498.3 Gene:abcg2d / 735310 ZFINID:ZDB-GENE-050517-38 Length:658 Species:Danio rerio


Alignment Length:640 Identity:199/640 - (31%)
Similarity:345/640 - (53%) Gaps:81/640 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 RQLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFR-SPQGIQ 152
            |..|.:..|..|....:   :|.:|.::.|:..|| |.|::|.:|:||::.|:.||.| .|.|: 
Zfish    46 RYRVEQKTGPVCRRTTV---QKEILLDLNGIMRPG-LNAILGPTGSGKSSFLDVLAGRKDPAGL- 105

  Fly   153 VSPSGMRLLNG--QPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARV 215
               ||..|:||  ||.:.|.:.   .||.|||:.:|:||.||:|.|.|.:|:..|::.|::.|||
Zfish   106 ---SGEVLVNGALQPANFKCLS---GYVVQDDIVMGTLTVRENLSFSAALRLSSHVSPREKEARV 164

  Fly   216 DQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVV 280
            :.:|.||.|:|...:.:|.. .::|:|||||||.:...|.:.||.:|..||||:|||:.|||||:
Zfish   165 NHLISELGLNKVADSKVGTQ-IIRGISGGERKRTSIGMELIIDPSVLFLDEPTTGLDASTAHSVL 228

  Fly   281 QVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNP 345
            .:||:::.:|:|:|::||||...::.|||.:.|:|.|:..:.|...:|:|:||.:|..|..:.||
Zfish   229 LLLKRMAGQGRTIIMSIHQPRFSIYRLFDSLTLLANGKQVYHGPAQDALDYFSNIGYACEAHNNP 293

  Fly   346 ADFYVQVLAVVPGREIESRDRIAKI-------CDNFAISK-------------------VARDME 384
            |||::.|:         :...:.||       ||..|:|:                   |..:::
Zfish   294 ADFFLDVI---------NGSSVTKIQNNGDAECDVSAVSRQSVEDQLMEKYRSCSFARAVRAELD 349

  Fly   385 QLLATKNLEKPLEQPE-NGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLI 448
            .::.||:........| :..||.:::..|.|.||||::.:::..|.....:|..||::|.::|.|
Zfish   350 HIIQTKDSSSSSVAAECHSITYSSSFCQQLRWVLWRTFWNLMLNPQTSVAQLAVTTLMAAIVGAI 414

  Fly   449 FLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIA 513
            |.|.:..|.|:.|..|.:|...||..|..:.|. .:|.:|..:|:.|..|..||...:||.|.::
Zfish   415 FYGVKDDQSGIQNRFGVLFFITTNQCFSTLSAA-ELFITERKLFIHEYTSGYYRVSVFFLSKILS 478

  Fly   514 ELPLFLTVP-LVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVG 577
            ::....|:| ::|:.:.|.||||:.....||  :.::|::         |:||.:::.:||:|..
Zfish   479 DIITQRTIPSVLFSCVVYFMIGLKPTASAFF--IFMLTVI---------LVSCTAAAMAMAISAD 532

  Fly   578 PPVI-----------IPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVE-PGEI 630
            ..|:           |..::|.|..:|..|:..:|.||.|||..||..|.|.||::..:. .|.:
Zfish   533 QSVVAVANILMTVSFIFMMIFSGLLVNLKSIMDWLSWLKYLSIPRYGLEALEINEFVGLSFCGNV 597

  Fly   631 SCTSSNTT-----CPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLALR 680
            |.:.::..     |.....:..:.:::|:..|..::|.|.::.:.|.::||:.||
Zfish   598 SESLASPAAHVLMCTGEQHLTFQGIDYSSWGLWQNHVALTVMTLIFLIIAYIKLR 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 199/640 (31%)
abcg2dXP_009292498.3 PRK10535 56..658 CDD:333000 196/630 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574373
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm6474
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.750

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