DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and abcg2

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_012819987.2 Gene:abcg2 / 734088 XenbaseID:XB-GENE-991895 Length:682 Species:Xenopus tropicalis


Alignment Length:617 Identity:195/617 - (31%)
Similarity:334/617 - (54%) Gaps:45/617 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 GLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFR-SPQGIQVSPSGMRL 160
            ||.|..:   ...:.:|.:|.|:..|| |.|::|.:|:||::||:.||.| .|.|:    ||..|
 Frog    70 GLICCRK---VTERVILNDVNGIMRPG-LNAILGPTGSGKSSLLDVLAARKDPNGL----SGQVL 126

  Fly   161 LNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLS 225
            ::|:| .....:....||.|||:.:|:|:.||:|.|.|.:|:||.:..:::..|::|||:||.|:
 Frog   127 VDGEP-QPSNFKCLSGYVVQDDVVMGTLSIRENLQFSAALRLPRSVKQKEKDERINQVIKELGLT 190

  Fly   226 KCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKG 290
            |...:.:|.. .::|:|||||||.....|.:|||.:|..||||:|||:.||::|:.:||::|::|
 Frog   191 KVADSKVGTQ-FIRGVSGGERKRTNIGMELITDPGILFLDEPTTGLDASTANAVLLLLKRMSRQG 254

  Fly   291 KTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL-- 353
            ||:|.:||||...:|.|||.:.|:|.||:.|.|...:|:|:|:.:|.:|.::.|||||::.::  
 Frog   255 KTIIFSIHQPRYSIFRLFDSLTLLAGGRLLFHGPSRDALDYFTGLGYECESHNNPADFFLDIING 319

  Fly   354 ---AVVPGR--EIESRDRIAKICDNFAISKVARDMEQLLATK---NLEKPLEQPENG-------- 402
               ||...:  ::|..:...::.||.:.:.|....||...|.   ..:..||:...|        
 Frog   320 DSTAVALNKLEDVELENEQKEVNDNGSKTVVENLSEQFCTTSYYLETKAELEKMSLGKKIKSNFF 384

  Fly   403 ---YTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNING 464
               .||..::..|.:.|..||:.::.:.|.....:::.|.::|:::|.||.|.:....|:.|..|
 Frog   385 ARQITYNTSFLHQLKWVCKRSFKNLWRNPQASIAQVMVTLVLALIVGAIFFGVKEDVSGIQNRVG 449

  Fly   465 AIFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVP-LVFTAI 528
            ::|...||..|.:|.| |.:|..|..:|:.|..|..||...||..|...:|....|:| ::||::
 Frog   450 SLFFVTTNQCFSSVSA-IELFIVEKKIFIHEYISGYYRLSAYFFAKLFTDLLPMRTLPSIIFTSV 513

  Fly   529 AYPMIGLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLN 593
            .|.|||.:|....||..:..:.::|..:.|....::......::|..:.....:..::|.|..:|
 Frog   514 IYFMIGFKATAGAFFTMMFTLMMIAYTAASMALAVAAGQDVVAVANLLMTICFVFMIIFSGLLVN 578

  Fly   594 SGSVPVYLKWLSYLSWFRYANEGLLINQWADVE---------PGEISCTSSNT--TCPSSGKVIL 647
            ..||..::.||.|.|..||....|.||::.::.         .|..:||.|:.  ||.....:.:
 Frog   579 LTSVMDWISWLKYFSIPRYGLTALQINEFTNLNFCNGLNTTIQGNPNCTGSSPFGTCTGEEYLTV 643

  Fly   648 ETLNFSAADLPLDYVGLAILIVSFRVLAYLAL 679
            :.::||...|..:::.||.:|..|..:|||.|
 Frog   644 QGIDFSTWGLWQNHLALACMIAIFLTIAYLKL 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 195/617 (32%)
abcg2XP_012819987.2 3a01204 73..675 CDD:273361 192/612 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55852
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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