DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and CG4822

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001033861.1 Gene:CG4822 / 33170 FlyBaseID:FBgn0031220 Length:677 Species:Drosophila melanogaster


Alignment Length:613 Identity:172/613 - (28%)
Similarity:300/613 - (48%) Gaps:66/613 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGI-QVSPSGMRLLNGQPVDAKEMQA 173
            |.:|:.|.|:.:..||.|::|.||||||||||.||     |. .|..||..|:|..|.|.:..:.
  Fly    73 KTILRRVNGMFHSHELTAIIGPSGAGKTTLLNLLA-----GFGAVCESGEILVNNSPRDMRVFRK 132

  Fly   174 RCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRV 238
            ...|:.|.|:.....|..|.:|..|.:::.:.|..:|::..:|:::..|.|....:|:      .
  Fly   133 MSRYIMQTDVLDSQFTVLEMMILAANLKLGKELNLKQKLEVIDEILGMLRLKDTLNTM------A 191

  Fly   239 KGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSE 303
            :.|||||||||..|.|.:.:||::..||||:|||..::...:.:||.|:..|:|||.:||.||::
  Fly   192 QKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAK 256

  Fly   304 LFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL--------------A 354
            :||:.|.:.::|||:..:.|..|..|.|....|..||..||||||.::|.              |
  Fly   257 IFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEA 321

  Fly   355 VVPGR-------EIESRDRIAKI-CDNFAISKVARD-MEQLLATKNLEKPLEQPENGYTYKATWF 410
            |..|:       .:|......|. ..:.|.|...|| .::.::.|.||.           |.:|:
  Fly   322 VGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEA-----------KCSWW 375

  Fly   411 MQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTF 475
            :|::.:|.|..:.:.::...:|::.....::|:|:|.::.|...:....:...|.:|..:....:
  Fly   376 LQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLY 440

  Fly   476 QNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVL 540
            ..:...:..|.:|:.:..||..::.||..:|:.....::||....:.:::.:|.|.|   .:..|
  Fly   441 LPMMPVLLYFPTEINLLKREYNNQWYRLSSYYAAMVTSKLPSMFILAVIYLSIVYLM---SSQPL 502

  Fly   541 HFFNCLALVTL---VANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGS---VPV 599
            .:|....|.|:   .|..|.|||.|||...|..: |:.:||.:.:|.:|...:.:..|.   :..
  Fly   503 EWFRFAMLFTIAFVTALTSDSFGLLISSRLSLVN-AMFMGPVLAVPLILLSIYGIGYGGGTYISP 566

  Fly   600 YLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNTTCP-SSGKVILETLNFSAADLPLDYVG 663
            .:::|.:||:.|::.|||:.:.: |....:..|..:...|. ...||:|..|.|.    .:.|:.
  Fly   567 LMRFLMHLSYLRHSMEGLVASLY-DYGRADTICEDTEIFCSFKKSKVLLAFLGFE----NMHYLW 626

  Fly   664 LAILIVSFRVL----AYLALRLRARRKE 687
            ....::||.:|    ||..:|||.:..|
  Fly   627 SLSCLMSFYLLFTVAAYFMIRLRLKHSE 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 171/611 (28%)
CG4822NP_001033861.1 ABCG_EPDR 51..276 CDD:213180 78/213 (37%)
3a01204 67..654 CDD:273361 171/611 (28%)
ABC2_membrane 381..587 CDD:279410 47/209 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438919
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
87.850

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