DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and Abcg2

DIOPT Version :10

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_852046.1 Gene:Abcg2 / 312382 RGDID:631345 Length:657 Species:Rattus norvegicus


Alignment Length:663 Identity:207/663 - (31%)
Similarity:345/663 - (52%) Gaps:70/663 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPAPRKHLLKNVCG 118
            |..|..|:..|||....::|::.....|.   ||:  ||.:|            ..|.:|.::.|
  Rat    21 PGMSSRGARTLAEGDVLSFHHITYRVKVK---SGF--LVRKT------------AEKEILSDING 68

  Fly   119 VAYPGELLAVMGSSGAGKTTLLNALAFR-SPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDD 182
            :..|| |.|::|.:|.||::||:.||.| .|:|:    ||..|:||.|..| ..:....||.|||
  Rat    69 IMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGL----SGDVLINGAPQPA-NFKCSSGYVVQDD 127

  Fly   183 LFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERK 247
            :.:|:||.||:|.|.|.:|:|:.:...::..|::.:|:||.|.|...:.:|.. ..:|:||||||
  Rat   128 VVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQ-FTRGISGGERK 191

  Fly   248 RLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKIL 312
            |.:...|.:|||.:|..||||:||||.||::|:.:||::|::|:|:|.:||||...:|:|||.:.
  Rat   192 RTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLT 256

  Fly   313 LMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL-----AVVPGREIESRD------- 365
            |:|.|::.|.|...:|:::|:..|..|....|||||::.|:     ||:..|..:..:       
  Rat   257 LLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNRGEQDHEANKTEEP 321

  Fly   366 --RIAKICDNFA--------ISKVARDMEQLLATKNLEKPLEQPENGYT------YKATWFMQFR 414
              |...|.:|.|        ..:...:::||        |:.|.:.|.:      |..::..|.|
  Rat   322 SKREKPIIENLAEFYINSTIYGETKAELDQL--------PVAQKKKGSSAFREPVYVTSFCHQLR 378

  Fly   415 AVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVF 479
            .:..||:.::|..|.....:||.|.::.::||.::.|.:....|:.|..|..|...||..|.:|.
  Rat   379 WIARRSFKNLLGNPQASVAQLIVTVILGLIIGALYFGLKNDPTGMQNRAGVFFFLTTNQCFTSVS 443

  Fly   480 ATINVFTSELPVFMREARSRLYRCDTYFLGKTIAE-LPLFLTVPLVFTAIAYPMIGLRAGVLHFF 543
            | :.:|..|..:|:.|..|..||..:||.||.::: ||:.....:::|.:.|.|:||:..|..||
  Rat   444 A-VELFVVEKKLFIHEYISGYYRVSSYFFGKLVSDLLPMRFLPSVIYTCLLYFMLGLKRTVEAFF 507

  Fly   544 NCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLS 608
            ..:..:.:||..::|....|:...|..|:|..:.....:..:||.|..:|..::..:|.||.|.|
  Rat   508 IMMFTLIMVAYTASSMALAIAAGQSVVSVATLLMTISFVFMMLFSGLLVNLRTIGPWLSWLQYFS 572

  Fly   609 WFRYANEGLLINQWADVE--PG-----EISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAI 666
            ..||....|..|::...|  ||     ..:|.:|.|.|..:..:|.:.::.|...|..::|.||.
  Rat   573 IPRYGFTALQHNEFLGQEFCPGLNVTMNSTCVNSYTICTGNDYLINQGIDLSPWGLWRNHVALAC 637

  Fly   667 LIVSFRVLAYLAL 679
            :|:.|..:|||.|
  Rat   638 MIIIFLTIAYLKL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 201/649 (31%)
Abcg2NP_852046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 1/3 (33%)
3a01204 46..651 CDD:273361 200/638 (31%)

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