DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and Abcg3l3

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:695 Identity:195/695 - (28%)
Similarity:334/695 - (48%) Gaps:118/695 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KNYGTLRPPSPPEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPA 107
            :.||.|     ||.:.|....|.|....::||:.....| |.|...||           :.|:  
  Rat    15 RRYGDL-----PETNTSDPETLTEEAVLSFHNISYRETV-QSGFPLRQ-----------QTHV-- 60

  Fly   108 PRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAF-RSPQGIQVSPSGMRLLNGQPVDAKEM 171
              ...|.::.|:..|| |.|:||.....::.||:.||. |.|.|:    ||..|:||:|..| ..
  Rat    61 --MERLSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDPCGL----SGDILVNGKPQPA-NF 117

  Fly   172 QARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPG 236
            :....||.|:|:.:.::|.|::|.|.|.:|:|..:|..::..|:::|::.|.|.|.|:|      
  Rat   118 KCTSGYVPQNDVIMHTVTVRDNLEFSAALRLPMTITRNEKRRRINEVLELLHLEKEQNT------ 176

  Fly   237 RVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPS 301
              |..|...|||.:.|.|.:|:.|:|..|:||:|||..|...::.||:::|:||:|||.:|:||.
  Rat   177 --KPRSKELRKRTSIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLRRMSKKGRTVIFSINQPQ 239

  Fly   302 SELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL------AVVPGRE 360
            ..:|..||.:.|:|.|::.|.|...:|:::|:..|.|..::.|||||::.|:      ....|.|
  Rat   240 YSIFRFFDSLTLVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFFLDVINGGLCDTEEDGHE 304

  Fly   361 IESRDRI--------AKICDNFAISKVARD----MEQLLATKNLEK--PLEQPENGYTYKATWFM 411
            .:..:.:        .|:.:.:|.|.:..|    ::|||..:..::  .:|.     |:...::.
  Rat   305 ADEHEDLYERLHQVTEKLANMYAQSPLHSDTRAKLDQLLGEQKQDRRSAMET-----TFVTPFWH 364

  Fly   412 QFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIF--LGQQLTQVGVMNINGAIFLFLTNMT 474
            ||..:..||:.:....|.:..::.|...::|:.:|.||  |....|:|   .....:..|||.  
  Rat   365 QFGWITLRSFKNFKGFPWVTVIQAIIAVILAVFVGTIFRLLQNVCTEV---KARAGLLFFLTG-- 424

  Fly   475 FQNVFATINVFTSELPV-----FMREARSRLYRCDTYFLGKTIAEL-PLFLTVPLVFTAIAYPMI 533
            |:.:   ::|...||.:     |:.|..|..||..:||.||.:||| |..|...::||.|.|.:.
  Rat   425 FECI---LSVSAGELFLLDRNHFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSMIFTLITYFIA 486

  Fly   534 GLRAGVLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVG--------PPVIIP-----FL 585
            |::.||..||..:..|.::             |||::|::||:|        |..:|.     .|
  Rat   487 GMKTGVKGFFVTIFTVMML-------------ASSASSLSLSLGAGENTAALPTTLITIYFMFML 538

  Fly   586 LFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNT----TCPS----S 642
            .|.|..|.|.:....|.|:.|||...|....||.|::.    |:..|...||    .|.:    :
  Rat   539 FFSGLSLFSINFLPQLSWIQYLSIPHYGFRALLHNEFL----GQNFCPEHNTEEVSRCQNYVICT 599

  Fly   643 GKVILETLNFSAADLPL--DYVGLAILIVSFRVLAYL-ALRLRAR 684
            |:..|:.|:..::....  :::.|..:::...:::|: .|||:.|
  Rat   600 GEEFLQNLDIDSSSWGFWENHLALTCIMIILLMISYVRLLRLKKR 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 187/670 (28%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 178/623 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.710

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