DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and Abcg3

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:XP_017176394.1 Gene:Abcg3 / 27405 MGIID:1351624 Length:683 Species:Mus musculus


Alignment Length:697 Identity:189/697 - (27%)
Similarity:312/697 - (44%) Gaps:132/697 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PSAEHLNNGDSGAASQ---------------SCINQG-----FGQAKNYGTLRPPSP-------- 53
            |:.:|.:.|...:|.|               ||.:..     ..|.|.    .||..        
Mouse    22 PAPDHDHRGSKSSAEQKPEPLAPSKDPSCKSSCASSNLSPCIISQWKK----EPPEMASNNDPTV 82

  Fly    54 -----------PEDSGSGSGQLAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPA 107
                       ||.:.|....|.|....::||:.....| |.|...|      :..:..||    
Mouse    83 ISMIERHLCDLPETNTSDLKTLTEEAVLSFHNISYQETV-QSGFPLR------KKAYVIER---- 136

  Fly   108 PRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAF-RSPQGIQVSPSGMRLLNGQPVDAKEM 171
                 |.|:.|:..|| |.|:||.....::.||:.||. |.|:|:    ||..|:||:|..| ..
Mouse   137 -----LSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRDPRGL----SGDILINGKPRPA-NF 190

  Fly   172 QARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPG 236
            :....||.|:|:.:|::|.|::|.|.|.:|:|..:|..::..|:::|::.|.|:|.|:       
Mouse   191 KCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRINEVLELLHLNKEQN------- 248

  Fly   237 RVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPS 301
             :|..|...|||.:.|.|.:|:.|:|..|:||:|||..|...|:.||:::|:||:|:|.:|:||.
Mouse   249 -IKPRSKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKKGRTIIFSINQPQ 312

  Fly   302 SELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL---------AVVP 357
            ..:|:.||.:.|:|.|:|.|.|...:|:::|...|....::.|||||::.|:         ....
Mouse   313 YSIFKFFDSLTLVASGKVMFHGPAQDALEYFRSAGYNYESHNNPADFFLDVINGGFSNILDTEED 377

  Fly   358 GREIESRDRI--------AKICDNFAISKVARD----MEQLLATKNLEKPLEQPENGYTYKATWF 410
            |.|.:..:.:        .|:.:.:|.|.:..:    ::|||.    |:.||:.....|...|.|
Mouse   378 GHEDDKYEELFERQYQVTGKLANMYAQSPLYSETRAILDQLLG----EQKLERSSAVETTCVTPF 438

  Fly   411 M-QFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMT 474
            . |.:.::.:|:.:....|.:..::.|.|.::|..:|..|...:...:.|....|.::|......
Mouse   439 CHQLKWIICQSFKNFKGFPWVTVIQAIITVILATAVGTAFRVLKNDCIEVQMRAGLLYLLTIFQC 503

  Fly   475 FQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAEL-PLFLTVPLVFTAIAYPMIGLRAG 538
            ..:|.|. .:|..:...|:.|..|..||..:||.||.:||| |..|....||:.|.|.:.|::..
Mouse   504 ITSVSAG-ELFVIDRVRFLHEHTSGYYRVSSYFFGKLLAELIPRRLLPSTVFSLITYVIAGVKMS 567

  Fly   539 VLHFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGP---PVIIPFLL----------FGGF 590
            :..||..:..:.::             |.|::|:.||:|.   .|.:|.||          |.|.
Mouse   568 MKCFFTMICTIMVL-------------AYSASSLPLSIGAGENAVAVPTLLVTIYFVFMLFFSGL 619

  Fly   591 FLNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTSSNT 637
            .|.|||....|.|:.|.|...|....||.|::.    |:..|...||
Mouse   620 SLYSGSFLPKLSWIQYFSIPHYGFRALLHNEFL----GQNFCPEHNT 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 173/607 (29%)
Abcg3XP_017176394.1 3a01204 137..670 CDD:273361 165/562 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.710

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