DRSC/TRiP Functional Genomics Resources

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Protein Alignment w and Abcg2

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001342406.1 Gene:Abcg2 / 26357 MGIID:1347061 Length:657 Species:Mus musculus


Alignment Length:655 Identity:206/655 - (31%)
Similarity:341/655 - (52%) Gaps:74/655 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LAENLTYAWHNMDIFGAVNQPGSGWRQLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAV 128
            |||....::|::.....|.   ||:  ||.:|            ..|.:|.::.|:..|| |.|:
Mouse    31 LAEGDVLSFHHITYRVKVK---SGF--LVRKT------------VEKEILSDINGIMKPG-LNAI 77

  Fly   129 MGSSGAGKTTLLNALAFR-SPQGIQVSPSGMRLLNGQPVDAKEMQARC--AYVQQDDLFIGSLTA 190
            :|.:|.||::||:.||.| .|:|:    ||..|:||.|..|   ..:|  .||.|||:.:|:||.
Mouse    78 LGPTGGGKSSLLDVLAARKDPKGL----SGDVLINGAPQPA---HFKCCSGYVVQDDVVMGTLTV 135

  Fly   191 REHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEA 255
            ||:|.|.|.:|:|..:...::..|::.:|:||.|.|...:.:|.. .::|:|||||||.:...|.
Mouse   136 RENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGTQ-FIRGISGGERKRTSIGMEL 199

  Fly   256 LTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAEGRVA 320
            :|||.:|..||||:||||.||::|:.:||::|::|:|:|.:||||...:|:|||.:.|:|.|::.
Mouse   200 ITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLLASGKLV 264

  Fly   321 FLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVL-----AVVPGREIESR---------------- 364
            |.|...:|:::|:..|..|....|||||::.|:     ||:..||.:..                
Mouse   265 FHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNREEQDNEANKTEEPSKGEKPVI 329

  Fly   365 DRIAKICDNFAI-SKVARDMEQLLATKNLEKPLEQPENGYT------YKATWFMQFRAVLWRSWL 422
            :.:::...|.|| .:...:::||        |..|.:.|.:      |..::..|.|.:..||:.
Mouse   330 ENLSEFYINSAIYGETKAELDQL--------PGAQEKKGTSAFKEPVYVTSFCHQLRWIARRSFK 386

  Fly   423 SVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVFTS 487
            ::|..|.....:||.|.::.::||.|:...:....|:.|..|.:|...||..|.:|.| :.:|..
Mouse   387 NLLGNPQASVAQLIVTVILGLIIGAIYFDLKYDAAGMQNRAGVLFFLTTNQCFSSVSA-VELFVV 450

  Fly   488 ELPVFMREARSRLYRCDTYFLGKTIAE-LPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTL 551
            |..:|:.|..|..||..:||.||.::: ||:.....::||.|.|.|:||:..|..||..:..:.:
Mouse   451 EKKLFIHEYISGYYRVSSYFFGKVMSDLLPMRFLPSVIFTCILYFMLGLKKTVDAFFIMMFTLIM 515

  Fly   552 VANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEG 616
            ||..::|....|:...|..|:|..:.....:..:||.|..:|..::..:|.||.|.|..||....
Mouse   516 VAYTASSMALAIATGQSVVSVATLLMTIAFVFMMLFSGLLVNLRTIGPWLSWLQYFSIPRYGFTA 580

  Fly   617 LLINQWADVE--PG-----EISCTSSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVL 674
            |..|::...|  ||     ..:|.:|...|..:..:|.:.:..|...|..::|.||.:|:.|..:
Mouse   581 LQYNEFLGQEFCPGFNVTDNSTCVNSYAICTGNEYLINQGIELSPWGLWKNHVALACMIIIFLTI 645

  Fly   675 AYLAL 679
            |||.|
Mouse   646 AYLKL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 203/651 (31%)
Abcg2NP_001342406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
3a01204 46..651 CDD:273361 202/640 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831365
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55852
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2636
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.630

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