DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and bfr1

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_587932.3 Gene:bfr1 / 2539195 PomBaseID:SPCC18B5.01c Length:1530 Species:Schizosaccharomyces pombe


Alignment Length:698 Identity:205/698 - (29%)
Similarity:315/698 - (45%) Gaps:121/698 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EHL--NNGDSGAASQSCINQG-------FGQAKNYGTLRPPSPPEDSGSGSGQLAENLTYAWHNM 75
            |:|  ..|.:..|.::.:|:|       .||....|.:...||..:         |.|...:..:
pombe   820 EYLVFRRGHAPDAVKAAVNEGGKPLDLETGQDTQGGDVVKESPDNE---------EELNKEYEGI 875

  Fly    76 ----DIFGAVNQPGSGWRQLVNRTRGLFCN-ERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAG 135
                |||        .||.|         | :..|....:.||..|.|...||:|.|:||.||||
pombe   876 EKGHDIF--------SWRNL---------NYDIQIKGEHRRLLNGVQGFVVPGKLTALMGESGAG 923

  Fly   136 KTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMV 200
            ||||||.||.|...|:   .:|..|:||:.:|: ..|.|..||||.|:.||..|.||.|.|.|.:
pombe   924 KTTLLNVLAQRVDTGV---VTGDMLVNGRGLDS-TFQRRTGYVQQQDVHIGESTVREALRFSAAL 984

  Fly   201 RMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLI-C 264
            |.|..:...::...|:.||:.|.:......|||.||  .||:..:|||.....|....|.||: .
pombe   985 RQPASVPLSEKYEYVESVIKLLEMESYAEAIIGTPG--SGLNVEQRKRATIGVELAAKPALLLFL 1047

  Fly   265 DEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLMAE-GRVAFLGTPSE- 327
            |||||||||.:|.|:|..|:||:..|:.::.||||||:.||:.||::||:.: |:..:.|...| 
pombe  1048 DEPTSGLDSQSAWSIVCFLRKLADAGQAILCTIHQPSAVLFDQFDRLLLLQKGGKTVYFGDIGEH 1112

  Fly   328 ---AVDFFSYVGA-QCPTNYNPADFYVQVLAVVPGREIESRDRIAKICDNFAISK-VARDMEQLL 387
               .:::|...|| .||.:.|||::.:.|:..  |....:.....::.:|....| ::.:::::.
pombe  1113 SKTLLNYFESHGAVHCPDDGNPAEYILDVIGA--GATATTNRDWHEVWNNSEERKAISAELDKIN 1175

  Fly   388 AT-------KNLEKPLEQPENGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILI 445
            |:       |.|.|     |:..||....:.|.:.|:.|::.|..:||.::..:|.......:.|
pombe  1176 ASFSNSEDKKTLSK-----EDRSTYAMPLWFQVKMVMTRNFQSYWREPSILMSKLALDIFAGLFI 1235

  Fly   446 GLIFLGQQLTQVGVMNINGAIF-LFLTNMT-------FQNVFATI-NVFTSELPVFMREARSRLY 501
            |..|..|.|   ||.||...:| :|:..:.       .|..|..: |||.      :||..|.:|
pombe  1236 GFTFYNQGL---GVQNIQNKLFAVFMATVLAVPLINGLQPKFIELRNVFE------VREKPSNIY 1291

  Fly   502 RCDTYFLGKTIAELPLFLTV-PLVFTAIAYPM--------IGLRAG---VLHFFNCLALVTLVAN 554
            ....:.....|.|:|..|.. .|.|....||:        .|.:.|   :|:.|..:...|    
pombe  1292 SWVAFVFSAIIVEIPFNLVFGTLFFLCWFYPIKFYKHIHHPGDKTGYAWLLYMFFQMYFST---- 1352

  Fly   555 VSTSFGYLISCASSSTSMALSVGPPVIIPFLL-FGGFFLNSGSVPVYLKWLSYLSWFRYANEGLL 618
                ||..::.|..:...| ||...::..|:: |.|....:.::..:..|:..|:.|.|..||||
pombe  1353 ----FGQAVASACPNAQTA-SVVNSLLFTFVITFNGVLQPNSNLVGFWHWMHSLTPFTYLIEGLL 1412

  Fly   619 INQWADVEPG-EISCTSSN--TTCPSSGKVILE------TLNFSAADL 657
                :|:..| .:.|.|..  |..|.||:...|      |.|.:|.:|
pombe  1413 ----SDLVHGLPVECKSHEMLTINPPSGQTCGEYMSAFLTNNTAAGNL 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 193/641 (30%)
bfr1NP_587932.3 ABC_trans_N <102..160 CDD:291196
3a01205 108..1516 CDD:273362 205/698 (29%)
ABCG_PDR_domain1 166..392 CDD:213200
ABC2_membrane 526..729 CDD:279410
PDR_CDR 741..835 CDD:283960 4/14 (29%)
ABCG_PDR_domain2 879..1107 CDD:213199 101/250 (40%)
ABC2_membrane 1206..1413 CDD:279410 56/228 (25%)
PDR_CDR <1474..>1508 CDD:283960
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I1742
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9277
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
TreeFam 1 0.960 - -
76.800

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