DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and wht-8

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_499442.2 Gene:wht-8 / 189976 WormBaseID:WBGene00012925 Length:619 Species:Caenorhabditis elegans


Alignment Length:618 Identity:222/618 - (35%)
Similarity:349/618 - (56%) Gaps:54/618 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 WRQLVNRTRGLFCNERHIPAPRKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQ 152
            ||.|...|:.           .:.||..|.|.|.|||::|:||:||||||||||.|..|:.:|:|
 Worm    36 WRNLKVTTKA-----------GRVLLNGVSGCAVPGEVIALMGASGAGKTTLLNTLLQRNLRGLQ 89

  Fly   153 VSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQ 217
            |  .|..|:|||.: .|.:.:..|||||:|||:|:||.:|||..||.:|:|...:...|..||::
 Worm    90 V--EGEILVNGQNI-GKGVTSVSAYVQQEDLFMGTLTVKEHLDIQAKLRLPPGTSTTARATRVNE 151

  Fly   218 VIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQV 282
            |:.|:.|.|.:.:.|||||..||:||||.||||||:|.:.:||::.|||||:||||   |..:||
 Worm   152 VMNEMLLEKPRDSRIGVPGIKKGISGGEMKRLAFATEMINNPPIIFCDEPTTGLDS---HMSLQV 213

  Fly   283 LKKLSQ----KGKTVILTIHQPSSELFELFDKILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNY 343
            :|.|.|    ||||:|.||||||||:||:|||::.:|:||:||.|...||:..||..|.|.|.:.
 Worm   214 VKTLEQMALEKGKTIICTIHQPSSEVFEIFDKVVFLAQGRIAFHGAIDEAIHHFSSCGYQVPDHT 278

  Fly   344 NPADFYVQVLAVVPGREIESRDRIAKICDNFAISKVARDMEQLLATKNLEKPLEQ--------PE 400
            ||||:::..||:.|......:.|..::||.|         |:....:.|.|.::|        |.
 Worm   279 NPADYFIDTLAIKPSEAEACKSRCQELCDKF---------EKSFYNERLTKLMDQTKDVRAMTPH 334

  Fly   401 NGYTYKATWFMQFRAVLWRSWLSVLKEPLLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGA 465
            :..||....:    |:.:|..|..::.|.::|.:|||...:.:.||.:|.|.:..|.|:.:..||
 Worm   335 HSATYPVLLY----ALFYRYMLDNIRNPAIMKAKLIQKLFMGLFIGTLFYGLETDQDGLASYKGA 395

  Fly   466 IFLFLTNMTFQNVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAY 530
            :|.:::.:|:..:|.......::.|..:||...|:|....|::.|..:.||:|....::....:|
 Worm   396 LFYYISELTYSTIFGIQAFMPADYPPLVREYDDRIYPISAYYIAKICSFLPIFTVDGIILVVSSY 460

  Fly   531 PMIGLRA--GVL--HFFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFF 591
            .::|..:  ||.  ..|.|:|:...||    :.|..:...:.|.::|::|..|::..|.|.||.|
 Worm   461 FLVGFPSDFGVFLRQIFTCMAIEWNVA----ALGIAVCATAPSYAIAVTVTGPLLTVFSLTGGLF 521

  Fly   592 LNSGSVPVYLKWLSYLSWFRYANEGLLINQWADVEPGEISCTS--SNTTCPSSGKVILETLNFSA 654
            .|...:|.::.|:.|||||||..|.|::||:...:...|:|.:  :...|..||.:.::..:|..
 Worm   522 TNIAEMPAWINWVQYLSWFRYGYESLVVNQFQHDQFANITCNANMNEQLCEKSGPIAIKNFSFDT 586

  Fly   655 ADLPLDYVGLAILIVSFRVLAYLAL--RLRARR 685
            |:|..::|.:..|.:...::.|:.|  |:.|.|
 Worm   587 ANLYTNWVAMIYLTIIIYIVGYMGLVRRVIANR 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 222/618 (36%)
wht-8NP_499442.2 3a01204 22..615 CDD:273361 219/612 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2636
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.700

Return to query results.
Submit another query.