DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment w and wht-5

DIOPT Version :9

Sequence 1:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_502352.1 Gene:wht-5 / 178182 WormBaseID:WBGene00008950 Length:695 Species:Caenorhabditis elegans


Alignment Length:591 Identity:206/591 - (34%)
Similarity:334/591 - (56%) Gaps:25/591 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQA 173
            |:.:||.:.|||.||||..:|||||||||||||.|..|:.:.|:.  .|..::||:.:.:.||:.
 Worm   115 RQEILKKIDGVARPGELTFIMGSSGAGKTTLLNILTGRNLKNIET--DGDIMINGRNMISNEMKK 177

  Fly   174 RCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRV 238
            ..|||||||:|||:||.||.|.|.|.:|.|..|...:..:.||:::..:||.||::|.:|.... 
 Worm   178 LSAYVQQDDVFIGTLTVRETLRFAAKLRSPSALGATELDSIVDELLVMMSLKKCENTKVGTMTE- 241

  Fly   239 KGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSE 303
            |.||.|||||||||.|.|||||:|.|||||||||||.:|.|::.|::|:.:|||||.||||||:.
 Worm   242 KSLSRGERKRLAFACEILTDPPILFCDEPTSGLDSFMSHQVIKALRQLTIEGKTVICTIHQPSTS 306

  Fly   304 LFELFDKILLMAEGRVAFLGTPSEAVD-FFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRD-- 365
            ::.:.|:::|:::|.||:.| |::.|| ||...|...|...:..|.:::|::   .:..|:.|  
 Worm   307 VYHMADQLILLSQGHVAYAG-PAKQVDAFFGRCGYPIPKFVSSPDHFMRVIS---HKSFETEDDY 367

  Fly   366 --RIAKICDNFAISKVARDMEQLLATKNLEKPLEQPENGYTYKATWFMQFRAVLWRSWLSVLKEP 428
              ||.||.....|.|..:.....|::...|.|...|   :|:..||..||..:..||.:.:.:|.
 Worm   368 NKRIEKIVLEHDIMKKEQSTHSTLSSSRREHPETAP---FTFPRTWTAQFFFIFQRSSIQLWRER 429

  Fly   429 LLVKVRLIQTTMVAILIGLIFLGQQLTQVGVMNINGAIFLFLTNMTFQNVFATINVFTSELPVFM 493
            .::.|:||||.:::|:||..:.|.::.:..:.:..|..|:.:..|....:...:.||..:.||.:
 Worm   430 SVLLVKLIQTLIMSIMIGSTYYGLEIDKKSLPSFKGFAFVSVQMMHMLFMMPAMTVFWKDYPVVV 494

  Fly   494 REARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLHFFNCLALVTLVANVSTS 558
            ||.::.:|....|:|.||.|:...:|..|::|:.|...|..|...|:...|.|.:..|::..:.|
 Worm   495 REFQANMYSPSAYYLAKTTADSIQYLVFPVIFSGILLGMTSLPYSVVIITNYLIINILLSLNACS 559

  Fly   559 FGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSYLSWFRYANEGLLI---N 620
            .|...:......:..::|.|.|.:|.::||||.:...::|.|....:::||::|..|.:.|   |
 Worm   560 VGQSFAAMCGHLATGMTVLPIVCVPLMVFGGFMITYEAIPWYFLPFAWVSWYKYGFEAITIVYFN 624

  Fly   621 QWADVEPGEISCT------SSNTTCPSSGKVILETLNFSAADLPLDYVGLAILIVSFRVLAYLAL 679
            ..:.:...|.:.:      |.::.| ::|...::...|....|.|||..:..:|:.:::|..|..
 Worm   625 HNSTISGCESNSSVATLKMSIDSNC-TTGIEFIKAQAFEETHLWLDYTVILAVILFWKILGALLF 688

  Fly   680 RLRARR 685
            ..|.||
 Worm   689 TWRIRR 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wNP_476787.1 3a01204 68..687 CDD:273361 206/591 (35%)
wht-5NP_502352.1 3a01204 88..695 CDD:273361 206/591 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

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